Gene Dshi_2581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2581 
Symbol 
ID5713479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2747856 
End bp2748656 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content68% 
IMG OID641268505 
Producthypothetical protein 
Protein accessionYP_001533915 
Protein GI159045121 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.132118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00012432 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCAGAT GGCAGGCTGT CTCTCTCGGC CTGCTGCCCC TTGCAGACAG GATGTCGCCC 
GTGCCGAAGA TGATGATTAC CCGCTTTTTC GCCGCCGCGC TGGTGGCTGG TCTTGCCCTG
GGGCAGGCGA CGCAGGCCCG GGCAACGGAG ACCGGGGTGT TCGACATCTC GCTAGGCGGG
ATCCGGGCGG CGGTGGTGCA ATATGCCGCC AATACCGAGG GCAACCGCTA TGCGGTGACC
GGCAAGATGA ACACCACCGG GTTGCTGGGC GCGGTGGTGC GGGCGTCCTA CGAGGCGACC
GCCCGAGGCA CCGAGCCGCG CCCGGGGCAG TATCGGCCGA CCTCGTTCAC AGAGGTGCGC
GACGCCTCCA AGGAGGTGAG CCGGGCCGAG ATGCTGTTTC GCAGTGGCCG GCCCCAGATC
AAGACCTATG ACCCGCCGCG CAAGTCCGAC CGGCATGCGG TGGACCCGGC GACCCAGTCG
GGGACGGTGG ACCCGATGAC GGTGATCTAT GCCGCTCTGC GTGACCAGCC GCGAGAGCGG
GTGTGCGACC TGTCCTTGCA GGTTTTCGAC GGCAAGCGGC GCAGCGAGGT ACGCCTGTCG
GACCCGGCGG AAGCGAGCGA TGGGCGGATC ACCTGCCAGG GGGTCTATCG CCGGATTGCG
GGGTGGTCGC CGGAATCCCT GGCCGAGCGG TCGCGGTTTC CGTTCCAGAT GACCTATGCG
CCCAAGGGCG AAGGGGTCTG GCGGGTGGTG CGGGTGACGA CCGATACGAC CTTCGGACGC
GCGGTGCTGC AACGGCGCTG A
 
Protein sequence
MSRWQAVSLG LLPLADRMSP VPKMMITRFF AAALVAGLAL GQATQARATE TGVFDISLGG 
IRAAVVQYAA NTEGNRYAVT GKMNTTGLLG AVVRASYEAT ARGTEPRPGQ YRPTSFTEVR
DASKEVSRAE MLFRSGRPQI KTYDPPRKSD RHAVDPATQS GTVDPMTVIY AALRDQPRER
VCDLSLQVFD GKRRSEVRLS DPAEASDGRI TCQGVYRRIA GWSPESLAER SRFPFQMTYA
PKGEGVWRVV RVTTDTTFGR AVLQRR