| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2571 |
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| Symbol | |
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| ID | 5713469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2738741 |
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| End bp | 2739532 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641268495 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001533905 |
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| Protein GI | 159045111 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.387243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000145169 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGGCA AGAAACCGAC CTGGGTGATC GACAAGGAAC GCGCCAAACG GGCGGCGGCG
GCCCAGACCG TCTGGCTCTT TGGCCTGCAC GCGGTGCGCG ATGCGCTGGA AAACCCCGCG
CGCACGAAAC TGCGGCTGGT GGTGACGCGC AACGCCGCCG ACAAGCTGGC CGAGGCCATC
GCCGGGGCCG GGATCGCACC GGAGATTGCC GACCCGCGCC GGTTTCCCGC GCCGCTCGAC
CCCGGCTCGG TCCACCAGGG CGCCGCGCTG GAGGTCAAGC CGCTCGCCTG GGGTCCGCTG
GCCGAGACGG TCCTCACCGG CCCGGCGGAC CGCCCGCCGC TGGTGGTGCT GCTGGACCGG
GTGACCGATC CCCACAATGT GGGCGCGATC CTGCGCTCGG CGGAGGTGTT CGGGGCCGCG
GCCGTGATCT CCACCGCCCG GTCCGCCGCA CCCGAAACCG GCGCGCTGGC CAAGACCGCC
TCCGGCGCGC TCGAACGCCA ACCCTATTTG CGGGTGCGCA ACCTGGCCGA GACCATGGAA
GAGCTGCGCG CCATGGGCTT CGTGCTCCTA GGGCTCGATG GCACCGCCGA GGACACCATC
GGCACGGCCC TGCGCGACCT CACAGACCGT CCCATCGCCC TGGTGTTGGG TGCCGAGGGA
CCGGGCCTGC GGGACAAGAC TAAGGAAACC TGCAACCGGC TGGTGAAAAT TCCCTTCGCC
CGCGACTTCG GATCGCTCAA TGTCTCGAAC GCGGCGGCGG TCGCACTTTA TGCTTGCCGG
GGCGAGGGAT GA
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| Protein sequence | MAGKKPTWVI DKERAKRAAA AQTVWLFGLH AVRDALENPA RTKLRLVVTR NAADKLAEAI
AGAGIAPEIA DPRRFPAPLD PGSVHQGAAL EVKPLAWGPL AETVLTGPAD RPPLVVLLDR
VTDPHNVGAI LRSAEVFGAA AVISTARSAA PETGALAKTA SGALERQPYL RVRNLAETME
ELRAMGFVLL GLDGTAEDTI GTALRDLTDR PIALVLGAEG PGLRDKTKET CNRLVKIPFA
RDFGSLNVSN AAAVALYACR GEG
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