| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2566 |
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| Symbol | |
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| ID | 5713463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2731137 |
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| End bp | 2733368 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641268489 |
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| Product | putative bifunctional enzyme |
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| Protein accession | YP_001533900 |
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| Protein GI | 159045106 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000104347 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000000000144647 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCAAGC CTGCCGCCAC CACTGGAGAC CGGGCCCGAG CCATGGACCG CGCCGATATC
GTGCATCAGA ACTTCCTGCG CCGGGTCGCG GCGCGCGATC TGCCCCCCGG CGCCGCGCCA
GACGGCCCGC TTTCGGCAGA CGAAGCGCGC AGCATCTACC GCGCCGCCTG CCTGACCCGC
GTGCTCGACC TGCAGAGCCG CAAGATGCAG AAGGCCGGAC AGGGATTCTA CACCATCGGC
TCCTCGGGGC ACGAGGCGAT GGCGGCCGTC GCCACCGCCC TGCGCCCGAC CGACATGGCC
TTCCTGCATT ACCGTGACGC CGCCTTCCAG GTCGCGCGCG CCGCCCAGGT GCCGGGCCAG
ACCCCGGCCC GCGACCTGCT TCTGAGCTTC GCCTGTTCGG CCGAGGACCC CATATCGGGG
GGGCGCCACA AGGTGCTCGG CTCCAGGGCG CTGAACATCC CGCCCCAGAC TTCGACCATC
GCCAGCCACC TGCCAAAGGC GGTGGGCGCC GCCTATTCCA TTGCCCCGGC GGCGCGGCAC
AAGCCTGAAC ATCGGGTACT CGACCCGGAC GGAATCGTCT GTTGCAGCTT CGGGGATGCC
TCGGTTAACC ATTCCACCGC GCAGGGCGCG TTCAACACCG CCAGCTGTAC CGCATACCGG
AATATCCCCC TGCCCCTTCT CTTCGTCTGC GAAGACAACG GGATCGGCAT CTCGACCAAA
ACCCCGCCGG GCTGGATTTC CGCGAGCCTC GGCGCGCGGC CCGGGATCAC CTATTTCCAC
GCCGATGGGC GCGACATCTA CGAAACCTTC CGCGTGGCCC GGGAGGCGGC GCATCATGTC
CGCAACAAGC GGCGCCCGGC GATCCTGCAC CTGGAAACGA TCCGGCTTTA TGGCCATGCG
GGCGCGGATG TGCCCACCAG CTACCTGCCC CGCGCCGAGG TCGAAGCGGC GGAGGCGGAC
GACCCGCTCC TGCACATGGT GCGGATGCTG GATGCGGCGG GCGTGCTGCC CTCTGCCGAC
GCGCTGACGC TTTACACCGA CTGTCATGGC GAGGTGGCCG ATCTGGCGCG TGACGTGGTT
AAACGACCTC GCCTGCGCAC CGCGGCAGAG GTCATGCACA GCCTCATCCC CCCGAAACGC
CCCTGCCGCA CCGGGAACGG GCCTGCGCCG GACGCGCGCG CGGCGGCCTT CGGGGCCGAT
TTCGACAGTC TCGATGCGCC TCAGCCCCTG TCGAAGATCC TGAACTTCAC GCTCACCGAC
CTGATGCTGG AGCATGGCGA GATCGTCCTG ATGGGTGAGG ATATCGGCCG CAAGGGCGGG
GTCTACGGCG TCACCCAGAA GCTGGCGCAA CGTTTTGGGC GCGACCGCGT GATCGACACC
CTGCTGGACG AACAATCCAT CCTCGGGCTC GCCATCGGCA TGGCCCAGAA CGGTTTCGTG
CCGATGCCCG AGATCCAGTT TCTCGCCTAT CTGCACAATG CCGAGGACCA GTTGCGGGGC
GAGGCAGCGA CCTTGCCCTT CTTCTCCAAC GGCCAATACA CGAACCCCAT GGTGCTGCGC
ATCGCGGGGC TGGGGTACCA GAAAGGGTTC GGCGGGCACT TTCACAACGA CAATGCGCTG
GCGGTCCTGC GCGACATTCC CGGCGTGATC CTTGCCTGCC CGTCCACCGG TGCCGATGCC
GCCCGAATGC TGCGCGAATG TGTGCGGCTG GCCCGGGAGG AACAGCGTGT GGTGGTTTTC
CTGGAACCCA TCGCGCTTTA CCCGATGCGC GATCTGCAGG GCGACAAGGA TGGCGGCTGG
ATGACCCGCT ACCCCCCGCC GGGGGAGCGC ATCGATCTCG GCCAAGTCGG CCAGCACGGC
ACCGGTACGG ATCTCGCGCT CGTGAGTTTC GGCAACGGGC ACTACCTGTG CCACAAGGCC
CTGCCGCAAC TTCGCGCCGC CGGGATCGAT CCGCGTATCA TCGACCTGCG CTGGCTGTCG
CCGCTGCCGG AAAGGTCCTT GCTGGAGGCG ATTGACGGCA TCCCCAACAT CCTGATCGTC
GACGAAACCC GCCACTCCGG CGGGGTCGCC GAAGGGCTCA TGGCCCTCCT ATCGGAGCGC
ACGAATGCCC GGCTCGCGCG CGACACCGCC GCAGACAGCT TCATCGCCAC CGGCCCGGCC
TATGCCGCCA CCCTGCCCTC GGTCGACAGC ATCACCACAG CAGCCAGAAC CCTGGTGTTT
CCCCCGGTCT GA
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| Protein sequence | MGKPAATTGD RARAMDRADI VHQNFLRRVA ARDLPPGAAP DGPLSADEAR SIYRAACLTR
VLDLQSRKMQ KAGQGFYTIG SSGHEAMAAV ATALRPTDMA FLHYRDAAFQ VARAAQVPGQ
TPARDLLLSF ACSAEDPISG GRHKVLGSRA LNIPPQTSTI ASHLPKAVGA AYSIAPAARH
KPEHRVLDPD GIVCCSFGDA SVNHSTAQGA FNTASCTAYR NIPLPLLFVC EDNGIGISTK
TPPGWISASL GARPGITYFH ADGRDIYETF RVAREAAHHV RNKRRPAILH LETIRLYGHA
GADVPTSYLP RAEVEAAEAD DPLLHMVRML DAAGVLPSAD ALTLYTDCHG EVADLARDVV
KRPRLRTAAE VMHSLIPPKR PCRTGNGPAP DARAAAFGAD FDSLDAPQPL SKILNFTLTD
LMLEHGEIVL MGEDIGRKGG VYGVTQKLAQ RFGRDRVIDT LLDEQSILGL AIGMAQNGFV
PMPEIQFLAY LHNAEDQLRG EAATLPFFSN GQYTNPMVLR IAGLGYQKGF GGHFHNDNAL
AVLRDIPGVI LACPSTGADA ARMLRECVRL AREEQRVVVF LEPIALYPMR DLQGDKDGGW
MTRYPPPGER IDLGQVGQHG TGTDLALVSF GNGHYLCHKA LPQLRAAGID PRIIDLRWLS
PLPERSLLEA IDGIPNILIV DETRHSGGVA EGLMALLSER TNARLARDTA ADSFIATGPA
YAATLPSVDS ITTAARTLVF PPV
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