| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2477 |
|---|
| Symbol | |
|---|
| ID | 5713373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 2630248 |
|---|
| End bp | 2630712 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641268400 |
|---|
| Product | putative leucine-responsive regulatory protein |
|---|
| Protein accession | YP_001533812 |
|---|
| Protein GI | 159045018 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.728563 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAACTCA TGGCGAAATT GGACCAGATC AACGAAAGGA TATTGCATGA GCTGAGCTGC
GATGGCCGGC TCAGCAATCT CGACCTGGCG GAGCGCGTGG GGCTTTCGCC CTCGGCCTGC
CTGCGCCGGG TTCAGGAGTT GGAGCGCACG GGAATCATCC AGGGCTACAA GGCGGTGCTG
AACCGCGCGG CGCTGGGGCA GGGGTTTACC GTCTATATCG CGGTGGGACT GTCGGAGCAT
ACAAAGGCCG ACCAGACCGG GTTCGAGCGG GCGGTCGCCA ATGCGCCAGA GGTGCGGGAG
TGCCACAACG TGACCGGCAC GGTGGAATAC CTGCTGCGGG TGGAGGTGGC GGATCTCGCC
GCTTACAAGA CGTTTCACAC CGATGTGCTG GGCACGCTGC CGCAGGTCTC CAGCCTGACA
TCCTATGTGG TAATGGACAG TCCCAAGGAT GCGCGGGCTT GCTGA
|
|---|
| Protein sequence | MQLMAKLDQI NERILHELSC DGRLSNLDLA ERVGLSPSAC LRRVQELERT GIIQGYKAVL
NRAALGQGFT VYIAVGLSEH TKADQTGFER AVANAPEVRE CHNVTGTVEY LLRVEVADLA
AYKTFHTDVL GTLPQVSSLT SYVVMDSPKD ARAC
|
|---|
| |