Gene Dshi_2465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2465 
Symbol 
ID5714121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2616086 
End bp2616544 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content59% 
IMG OID641268388 
Producthypothetical protein 
Protein accessionYP_001533800 
Protein GI159045006 
COG category 
COG ID 
TIGRFAM ID[TIGR02241] conserved hypothetical phage tail region protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.325818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATG CAGGAGACAA GCAGGGCGCC ACATGGCCGC TGCCGAAGTT TTACTTCAGC 
GTCAATCTTG GCGATCCGGG GCAGATCCCG TTTCAGGAGG TCTCGGGCCT CGACACCGAG
TCCGAAGCGA TCACCTACCG CGCCGGCGAC AACCCGGCCT TCAACGTCAT CAAGATGCCG
GGGCTGATCA AGTCCGGCAA CGTGACCCTG AAGAAGGGCA TCTTCGTCAG CGACAACCGT
TTCTGGACCT GGTTTGAGCA GATCAAGCTG AACACGATCA AGCGCCAATC CGTGGTCATA
AGCCTGCTGG ATCAGACCAA CAAGCCGACC ATGGTGTGGA AGCTCGCCAA TGCGTTTCCG
GTCAAGATCA CCGGCACGGA CATGAAGTCC GACGGCAACG AGGTGGCGGT CGAGACGCTG
GAGCTCGCCC ACGAGAAGCT GACGATCGAG AACGGGTAA
 
Protein sequence
MADAGDKQGA TWPLPKFYFS VNLGDPGQIP FQEVSGLDTE SEAITYRAGD NPAFNVIKMP 
GLIKSGNVTL KKGIFVSDNR FWTWFEQIKL NTIKRQSVVI SLLDQTNKPT MVWKLANAFP
VKITGTDMKS DGNEVAVETL ELAHEKLTIE NG