| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2462 |
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| Symbol | |
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| ID | 5714118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2612931 |
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| End bp | 2614718 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268385 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533797 |
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| Protein GI | 159045003 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3500] Phage protein D |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGA GCGTCTGGCT GCCGAATGCG GATCTCGTGA CCTCCGAGAT CAAGACCAAC
GGGGCGACCA TCCCCGACAT GGTGATGGTG TCCGGCATCA GCGTCCACCA CCGGCTCAAC
CGCGTGCCCG AGGCGGTGAT CAACATCGCC GACGGGAGCC GCGCGGAGGC CGATTTCCCG
GTCAGCGCCT CGTCCACCTT CACGCCCGGT GCCGAGATCG AGATCCTGCT GGGTTACCAC
AGCAAGAACC AGAGCGTCTT CAAGGGCATT ATCGTGGGCC AGCGTATCCG GGCGGACCCG
GGCGGGGGTA CCTATCTGGA GGTGCTGTGC AAGGACAAGG CGGTCGCCCT GACCGTGAGC
CGCGCGGCGG CCCAGTATCT CGACATGAGC GACAGCGACG TGATCGCGAA AATCGTGGGA
GATGCGGGGC TGAGCGCGGA TGTGACCGCG ACAAGCCTGA AGGTCGCCCA GCAGGCCAGG
GCCAACAGCT CGGATTGGGA TTTCATCCTG TCCAGGGCCG AGGTGAACGG GATGGTTGTC
ACGGTGGAGG CGGGCAAGCT GACCGTGGCG CCGCCGAAAT TCGATAACCC GGTGCTGAAC
GCCACCTATG GCGACTCGAT CCTCGATTTC GACCTTGAAT TGTCGGCCAC GGCGCAGCTC
GACAGCGTGA CCGCCCAGGC CTGGGACCCC AAGACCCAGG CGGTGATCAC CGGCAAAGGC
GCCGAGCCCA CGGTCAACAA GCAGGGCACC CTGACCGGCG CTAAGTTGTC CGCCGTGCTC
GGCGGGCAGA GCGCCACCCT GCAGGGCCCC GGTGCCGAGA CCGACGATGC CCTGGCCGAA
TGGGCGAGTG CCTGCCTGCT GAAATCCCGC ATGGCGCGCT ATGCGGGGCA GCTCAAGGTG
CCCGGGAACC CGACCCTGAA ACCCGGCACC CAGATCGAGC TGGCCGGGTT GGGCGCGGTG
TTCAATGGAA GTGCCTACAT GGTCGGGGTG CGCCATACGC TCGCAGAAGG GAGCTGGGAC
ACACAGCTCG AATTCGGCCT GTCGCCGGAC TGGTTTGCCG AGGCGCAGCG CGATGTCAGC
CCCGCGCCGG CGGCCGCGGT CCGCCCCGGT GTCACGGGGC TGGAGATCGC CACCGTGCTC
AAGACCGACG AAGACCCCGA GGGCGAGCGC CGGATCCAGG TCTCGATGCC CCTGCGGGTG
GGCGGGGACC TGGGGGTCTG GGTCCGGATC GCCAGTCCCT ATGCCACCAA CAACGCGGGC
TTCGAATTCC TGCCCGAGAT CGGCGACGAA GTGGTGCTGG GCTTTCTCCA TGGCGACCCG
GACAGCGCGA TCCTGCTGGG GGCGCTGCAT TCCAGCAAGA ACCCCGCCCC TGTCGTCCCC
GATGCCGAGA ACACCATCAA GACCCTCGTG ACCAAGGCGC AGCACAAGGT CACCTTCGAC
GACGACAAGA AGATCATCAC CGTCGAGACC CCGGGCGGGC ACAAGATCGT GCTGAGCGAC
GAGGATACTT CCGTCACCAT CACCGACAGC AACGACAACA AGCTGGAAAT GTCGGGTTCG
GGCATCGCCA TGACCTCGCC CAGCGACATC ACCATCTCCG CCGACGCGTC GGTGAAGATC
TCGGGCGCCA GCGGGGTGAC CGTTTCGTCG GACGCGGATG TGAGCGTGAA GGGCATGAAC
GTCTCGGCCG AGGCCGATAT CGGCATGACC GCCAAGGGCG GCGCATCGGC GGAGTTGTCG
GCCAGCGGCG AGACCACGGT CAAGGGCGCC ATGGTCATGA TCAATTGA
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| Protein sequence | MTESVWLPNA DLVTSEIKTN GATIPDMVMV SGISVHHRLN RVPEAVINIA DGSRAEADFP
VSASSTFTPG AEIEILLGYH SKNQSVFKGI IVGQRIRADP GGGTYLEVLC KDKAVALTVS
RAAAQYLDMS DSDVIAKIVG DAGLSADVTA TSLKVAQQAR ANSSDWDFIL SRAEVNGMVV
TVEAGKLTVA PPKFDNPVLN ATYGDSILDF DLELSATAQL DSVTAQAWDP KTQAVITGKG
AEPTVNKQGT LTGAKLSAVL GGQSATLQGP GAETDDALAE WASACLLKSR MARYAGQLKV
PGNPTLKPGT QIELAGLGAV FNGSAYMVGV RHTLAEGSWD TQLEFGLSPD WFAEAQRDVS
PAPAAAVRPG VTGLEIATVL KTDEDPEGER RIQVSMPLRV GGDLGVWVRI ASPYATNNAG
FEFLPEIGDE VVLGFLHGDP DSAILLGALH SSKNPAPVVP DAENTIKTLV TKAQHKVTFD
DDKKIITVET PGGHKIVLSD EDTSVTITDS NDNKLEMSGS GIAMTSPSDI TISADASVKI
SGASGVTVSS DADVSVKGMN VSAEADIGMT AKGGASAELS ASGETTVKGA MVMIN
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