Gene Dshi_2450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2450 
Symbol 
ID5714106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2593114 
End bp2594058 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content65% 
IMG OID641268373 
Producthypothetical protein 
Protein accessionYP_001533785 
Protein GI159044991 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAG TTTTTGCCTT GGCGGCGGCC GCTGCGATTG TCGGTGGTGA TGTCGTTGCA 
CAGGAATTTC CGGCCAAGAC CATCGAGGTC ATCACCCATG CGGGCAATGG CGGTGGCACG
GATGTGACCA CGCGGATGAT GATGATCCGG GCGCGGCGCG AGCTGGGCAC CGACATGGTC
GTGGTCAACA AGCGCGGCGG GGGCGGGGCC TCCGCCATGG ATTATTACCT GACCCAGGAC
GCGGACGGTC ACAGCATTCT GACCTTCACC ATCGGCCACT CGGCCACCGT GGCGCTGGGC
AAGACCGACA TGAAGCTGGA AGATGTGCGC CCGATCGCGC GCGGCACCGA TGATCCACAG
ATCCTGATGA CGCGCTGCGG TGTCTACGAC TCCGCCCAGG CCTTCGTCGA CGCCCAGAAG
GACGAACCGC TGAACTATGG CACCACCCAC CTGGGCGGGA TCGACGACGT GTCGGCCTTC
ATGTTCGCCC GGCGCGGCGA GCTTGCCACC CCGCGGATCG TCCCCTTCGA GGGCGGCGGC
GAGCTGGCCA CCCAGCTGGT CGCAGGCGCC GTGGATGTCG CGGTCCTGAA CCTCGCCGAG
GCAGGCTCCC AGATCGAAGC GGGCGATATC TGCCCCATCG TGGTTCTGGC GCCGGAACGG
ATGAGCGGTC TGCCCGATGT CTCCACCGCG CAGGAACTTG GCATCGACGC CAACTTCTCC
ACCGTGCGGG GCTTCGTGGT CCATGCGGAC ACCCCCGACG ATGTCGCGGC CAAGATCGAA
GAGGCGCTCC TGAACGCCAT GAACCACACG GTCTATCAGG GCTTCCTGAC TTCCGTGGGG
CTGGATGCCA GCTCGGTCGC GGGCTCCGAG GTCTGGGGCA ACCAGCTCAC CTCGATGCAG
GCAGACATGG ATGCCGCCCT GCGTGAGCTG GGCTTCATCG AGTAA
 
Protein sequence
MKKVFALAAA AAIVGGDVVA QEFPAKTIEV ITHAGNGGGT DVTTRMMMIR ARRELGTDMV 
VVNKRGGGGA SAMDYYLTQD ADGHSILTFT IGHSATVALG KTDMKLEDVR PIARGTDDPQ
ILMTRCGVYD SAQAFVDAQK DEPLNYGTTH LGGIDDVSAF MFARRGELAT PRIVPFEGGG
ELATQLVAGA VDVAVLNLAE AGSQIEAGDI CPIVVLAPER MSGLPDVSTA QELGIDANFS
TVRGFVVHAD TPDDVAAKIE EALLNAMNHT VYQGFLTSVG LDASSVAGSE VWGNQLTSMQ
ADMDAALREL GFIE