Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2446 |
Symbol | |
ID | 5714102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2589015 |
End bp | 2589926 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641268369 |
Product | putative dihydrodipicolinate synthetase |
Protein accession | YP_001533781 |
Protein GI | 159044987 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.314144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACCT ATTCCGGCAT CTGGCCCGTC GCCCCGACCC CCTTCAACGA GGATGGCACC CTCGATCTCG ATGGCATGAA GCGGGTCCTC GATTGTTTGA TCGACCAGGG GGCGGACGGG ATCTGCGTGC TCGCCAACTA CTCCGAGCAG TTCCTGATTT CCGATGCCGA ACGCGAGGTT CTGGCCCGGC TGAGCGTGGA GCATGTGGCC GGCCGTGTCC CGGTGATCGT CACCATCAGC CATTTCGCCA CCCAGATCGC GGTGGAGCGC GCGCGCTTTG CCAAGGATCT CGGCGCCGAT ATCGTGATGA TGATGCCGCC CTATCACGGC GCGCTCCTGA AGGGCACGCC GGAGCAGTCG TTCGAGCAGT TCGCCGCCGT GGGCGAGGTG GGCATCCCGA TCATGGTGCA GGATGCGCCG CTCTCGGGGG TCGATCTGCC CGTGGACCTG CTGGTGCGCA TGGCGCGCGA GATCGAGGCC GTGAAGCTCT TCAAGATCGA GTGCCCAAGG GCGGCCAACA AGATCCGCGC CTTGATCGCG CAGGGCGGTG CGGCCATCGA GGGCCCGTTC GACGGGGAGG AAGCCATCAC CCTGCTGGCC GATCTCGATG CCGGGGCCAC CGGCACGATG ACCAGCGGCA TGATCGTGGA CCAGATCAAG CCCGTGCTGA CCAGGTACCA CGCAGGCGAT GTCTCCGGCG CGACCGAGGC CTACGGGCGG GTCGCCATGG CGATCATCCA CGAGAACCGC CAATGCGGCT GGCAGTCCTG CAAGGCCGCG ATGGTGGAGG GCGGCGTGAT CGCCTCGGAA TTCTGCCGCC ACCCGATCGC GCCCCTGCAC CCGGCGATCC GGGCCCGGCT GATCGACCTG CTGCGCCCGC TCGACCCCCT CGTCCTGCGT TGGGGGCGGT GA
|
Protein sequence | MNTYSGIWPV APTPFNEDGT LDLDGMKRVL DCLIDQGADG ICVLANYSEQ FLISDAEREV LARLSVEHVA GRVPVIVTIS HFATQIAVER ARFAKDLGAD IVMMMPPYHG ALLKGTPEQS FEQFAAVGEV GIPIMVQDAP LSGVDLPVDL LVRMAREIEA VKLFKIECPR AANKIRALIA QGGAAIEGPF DGEEAITLLA DLDAGATGTM TSGMIVDQIK PVLTRYHAGD VSGATEAYGR VAMAIIHENR QCGWQSCKAA MVEGGVIASE FCRHPIAPLH PAIRARLIDL LRPLDPLVLR WGR
|
| |