Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2443 |
Symbol | |
ID | 5714099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2586430 |
End bp | 2587299 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641268366 |
Product | 3-hydroxyisobutyrate dehydrogenase related protein |
Protein accession | YP_001533778 |
Protein GI | 159044984 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGC CCGCGGTCGG CTTCATCGGC GTCGGGATGA TGGGGGCCGG GATGGCGGGA TGCCTGCTGT CCGCCGGGCA CCCGGTCACG CTGCTGGCCC ACCGCAACCG CGCGCCGCTC ACCCCCCTGC TGGACCGGGG CGCTCGGGAG GCCCCGGATG CGGTGACGCT CCTTGACGGC TGCGACGTGC TCTTCACCTG CCTGCCCGAC GCGGAGGCGG TGGCGGGACT GGCGGACACG CTCCTCCCCC ATACGCGCCC GGGCCAGATC TGGATCGACA CGACCACCTC ACGGCCAGAG ACCAGCGCCA CCCTTGCGCA CCGGCTCGAC GCGGCGGGGG CGGTGTTCTC GGACGCCCCG GTGACGGGCG GCCCGAAACA GGCGCAGGAC GGCGCGCTGA CCTCCCTGGT GGGCTGTGCC GCCGCGCAGT TCGACACCAT CGCATCCCTG GTCGGGACCT ATTCCACCGC CATCCGCCGT TTCGGCGATG CGGGCACCGG CCATGCGGCC AAGCTGCTCA ACAACCTCGT GACCCAGGGC ACCATGGTGC TGTTGTCGGA CGCGTTTCAG GCCGCTGGTC GGCTTGGGGT CGATCCCCGG GCGCTCTACG AGGTGATGAT GACCGGCGCG GCCCGCTCCG GCACCCTGCA AAAGGCCGTG CCCCCCGCGC TCGATGGTGA CTATACCGGC GCGCGGTTCT CCATCTCCAA CGCGGCCAAG GACCTGGGCT ATGCCGAGGC CCTGCTGGCC GACGCCCTCC CGGGCCGCGC CGATGTCGCC GGGGCGCTCG CCGCGCGGCT CGGCGCGCTG GCGGCCCAGG GTCGCGGCGC GGAGTTCGTC ACCACACTCT TCGACCCGAA CCGACCCTGA
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Protein sequence | MSLPAVGFIG VGMMGAGMAG CLLSAGHPVT LLAHRNRAPL TPLLDRGARE APDAVTLLDG CDVLFTCLPD AEAVAGLADT LLPHTRPGQI WIDTTTSRPE TSATLAHRLD AAGAVFSDAP VTGGPKQAQD GALTSLVGCA AAQFDTIASL VGTYSTAIRR FGDAGTGHAA KLLNNLVTQG TMVLLSDAFQ AAGRLGVDPR ALYEVMMTGA ARSGTLQKAV PPALDGDYTG ARFSISNAAK DLGYAEALLA DALPGRADVA GALAARLGAL AAQGRGAEFV TTLFDPNRP
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