| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2433 |
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| Symbol | rbsA1 |
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| ID | 5714089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2573902 |
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| End bp | 2575434 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641268356 |
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| Product | ribose import ATP-binding protein |
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| Protein accession | YP_001533768 |
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| Protein GI | 159044974 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCACC AAACGCAGAG ACCCTTGCCG TCCGAAGACC CGCCTGTGTC CCAGGCGGCG
CTGGCCCTGG CGCACATCAC CAAGACCTTC CCGGGCGTGA AGGCCTTGTC CGACGTCTCG
CTGTCTCTGT ACCCCGGCAA GGTGACCGCG CTGATCGGCG AGAACGGTGC CGGCAAGTCC
ACCGTCGTCA AGATCCTCAC CGGCATCTAC CAGCCCGATG GCGGCCGCAT CCTCGTTGAC
GGTCAGCCGG TGCCGTTTTC CACCCCGCAG GCCGCCGCCG ATCACGGGGT CACGGCGATC
CACCAGGAAA CGGTCCTGTT CGATGAGTTG TCCGTGGCCG AGAATATCTT TCTGGGCCAT
GCGCCGCGCG GGGCCTTCGG TCTGATCGAC TGGAAAAAGA CGACCGAGAA CGCCCGCGCC
CTGCTGACCA GCATCGGCGC CGAGCTCGAC CCGGATCACA AGCTCAAGGA CCTGGGCATT
GCCAACAAGC ACCTCGTGGC GATCGCCCGC GCCCTGTCGA TCGAGGCGCG CGTGGTCATC
ATGGACGAAC CCACCGCCGC GCTCTCCCAC AAGGAGATCG AAGAGCTCTA CGAGCTGGTC
GAAAGCCTCA AGGCCCAGGG CAAGGCGATC CTGTTCATCA GCCACAAGTT CGACGAGATC
TTCCGCATCG CGGACAATTA CACCGTCTTC CGGGATGGCC AGCTGATCGG GGACGGCGCG
ATCGCCGATG TAACCGAGGC CGACCTGGTC AAGATGATGG TGGGCCGCGA TGTCAGCCAG
ATTTTCCCGC AGCGCGCGCC CAATGTGGGC GACACGGTTC TGACCGTCCA AGGCTATGCC
CATCCCACCG AATTCGACGA TATCAGCTTC ACGTTGCGCG AGGGCGAGAT CCTGGGGTTC
TACGGACTGG TCGGGGCCGG GCGGTCGGAA TTCATGCAAT CCCTGTTCGG GATCACCCGC
CCCTCCGCCG GGTCGGTCGA GATCGGCGGG GCCAGGGCCG AAATCAGCTC CCCCGCGGAC
GCGGTCGATC ACGGGATCGT CTATGTCCCC GAGGACCGCG GCAAGCAAGG CGCCATCCTC
GACCTGCCGA TCTTTCAGAA CGTCACGCTG CCCTCGCTCG GGCGGATCTC CCGCAAGGGC
TTCCTGCGGC TGGCCGAGGA GTTCGCCCTG GCCCGCGAAT ACACCGAACG GCTCGACCTG
CGCGCGGCCT CGCTGGACAC CCATGTCGGC AACCTGTCCG GCGGCAACCA GCAGAAGGTC
GTGATCGCCA AATGGCTGGC CACCCGGCCC AGGGTGATCA TCCTCGACGA GCCCACCAAA
GGCGTCGATA TCGGCTCCAA GGCCGCGGTG CACGACTTCA TGGCGGAACT GGCGGCCCAG
GGGCTCGCCG TGATCATGGT CAGTTCGGAA ATTCCCGAAG TGCTGGGCAT GTCCGACCGC
GTGATCGTCA TGCGCGAGGG GCGCATCGTG GCCGAACTGG CGGGTGACGA CCTGCAACCT
GAAACCCTTG TCCGCCACGC CGCGGGGATC TGA
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| Protein sequence | MLHQTQRPLP SEDPPVSQAA LALAHITKTF PGVKALSDVS LSLYPGKVTA LIGENGAGKS
TVVKILTGIY QPDGGRILVD GQPVPFSTPQ AAADHGVTAI HQETVLFDEL SVAENIFLGH
APRGAFGLID WKKTTENARA LLTSIGAELD PDHKLKDLGI ANKHLVAIAR ALSIEARVVI
MDEPTAALSH KEIEELYELV ESLKAQGKAI LFISHKFDEI FRIADNYTVF RDGQLIGDGA
IADVTEADLV KMMVGRDVSQ IFPQRAPNVG DTVLTVQGYA HPTEFDDISF TLREGEILGF
YGLVGAGRSE FMQSLFGITR PSAGSVEIGG ARAEISSPAD AVDHGIVYVP EDRGKQGAIL
DLPIFQNVTL PSLGRISRKG FLRLAEEFAL AREYTERLDL RAASLDTHVG NLSGGNQQKV
VIAKWLATRP RVIILDEPTK GVDIGSKAAV HDFMAELAAQ GLAVIMVSSE IPEVLGMSDR
VIVMREGRIV AELAGDDLQP ETLVRHAAGI
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