| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2429 |
|---|
| Symbol | |
|---|
| ID | 5714085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 2570227 |
|---|
| End bp | 2571612 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641268352 |
|---|
| Product | carbohydrate kinase |
|---|
| Protein accession | YP_001533764 |
|---|
| Protein GI | 159044970 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.850932 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGTC ACGTCGCCGT CATCGACATC GGCAAGACCA ACGCCAAGCT GGCCCTGGTC
GACCGACAGA GCCTGACCGA AATCTCAGTG ATCACGCGGC CCAACACGGT CCTGCCGGGT
CCGCCCTGGC CGCATTTCGA CGTGGACGGG CACTGGGCCT TCCTGCTGGA CGGGCTGCGC
GATTTCCAGG CCCGCCACGG GATCGACGCG ATCTCGATCA CCACGCATGG CGCCTGCGCG
GCCCTTCTTC AAAAGGACGG CGCCTTGGCC GCTCCCATTC TCGACTACGA ACACCCCGGC
CCGGACGACA CCGCGCTGGC CTATGACGCG CTTCGCCCGC CTTTCTCGGA AACCGGGTCG
CCGCGCCTGG CGGGCGGGCT GAACATCGGC GCGCAACTCT TCTGGCAGTT CCACACCGAC
CCGGCCCTCA GGGACCGCAC CCGCCAGATC GTCACCTACC CGCAATTCTG GGGCGCCAAG
CTGACCGGCG TGACCGCGAC CGATGTCACC TCGCTGGGGT GTCATACCGA TCTGTGGAAC
CCCCATGCCG GGGCGGTCTC GTCGCTGGTC GACAGGCTCG GGCTGACGGG CAAGCTCGCC
CCCGTCCGCA AGCCGCATGA CATCCTCGGG CCGGTGCTGC CAGCGGTGGC CGCGCAGACC
GGGTTGGCCC CCGGCACGCC CGTTCATTGC GGCATCCACG ATTCCAACGC CTCGCTTCTG
CCTTACGTGT TGACCCAGAC CTCCCCCTTC AGCGTGATCT CCACCGGCAC CTGGGTCGTT
GCCATGTCCG TCGGCGGCAG GCCCGTGGTG CTCGATCCCG ATCTCGACAC GCTGATCAAC
GTCACGGCCC TCGGCCAGCC CGCGCCCTCC GCCCGGTTCA TGGGCGGGCG CGAGCATGAC
CTGGCCACCG AGGGCACCGG CCCGCCGCCG AGCGCCCAAG ACCTCGACCA CATCCTGTCG
CGGCAGATCC TGCTTTTGCC CGCCGTCGTG CCCGACACAG GCCCGTTCAA GGGCCAGGCC
TCGCGATGGG AAGGCGACGC CCCCGCGCCC GGGACCGGCG CCCGCGGCGC GGCCGTCGCG
CTCTATCTGG CGCTGGTGAC GGCCGAGTGC CTGTCCAATA TCGGGCATGC GGGCAAGATC
ATCGTCGAGG GACCTTTCGC CGGCAATCGC CTCTATCTCG AAATGCTCAG CGTCGCGATG
GAGGCGGATG TGGTCCGCGC CTCCGGCACC ACCGGAACCA GCGCCGGTGC GGCCCTGCTG
GCGGGCGGCG ATGCCGGCGC CCCGCCGCGC CCCGACAGCC TCGTCGCGCT ACCGGCGGCG
TCCAAGACCC GCCTGCGGCA CTACGCAGCG CATTGGCGGC AACGGGCCCG GCGCCGAACG
CCCTAG
|
|---|
| Protein sequence | MTRHVAVIDI GKTNAKLALV DRQSLTEISV ITRPNTVLPG PPWPHFDVDG HWAFLLDGLR
DFQARHGIDA ISITTHGACA ALLQKDGALA APILDYEHPG PDDTALAYDA LRPPFSETGS
PRLAGGLNIG AQLFWQFHTD PALRDRTRQI VTYPQFWGAK LTGVTATDVT SLGCHTDLWN
PHAGAVSSLV DRLGLTGKLA PVRKPHDILG PVLPAVAAQT GLAPGTPVHC GIHDSNASLL
PYVLTQTSPF SVISTGTWVV AMSVGGRPVV LDPDLDTLIN VTALGQPAPS ARFMGGREHD
LATEGTGPPP SAQDLDHILS RQILLLPAVV PDTGPFKGQA SRWEGDAPAP GTGARGAAVA
LYLALVTAEC LSNIGHAGKI IVEGPFAGNR LYLEMLSVAM EADVVRASGT TGTSAGAALL
AGGDAGAPPR PDSLVALPAA SKTRLRHYAA HWRQRARRRT P
|
|---|
| |