Gene Dshi_2395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2395 
Symbol 
ID5714051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2529060 
End bp2529518 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content68% 
IMG OID641268320 
Producttranscriptional regulator 
Protein accessionYP_001533732 
Protein GI159044938 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCG ATGACATCGA CCGTCGGCTC CTGCGGCTCT ATCAGTCCGA CCCGACCCTT 
TCGGCGGCGG AACTGGCCGA GGCCGCGCGC CTGCCGCGGG CCACCGCCTG GCGGCGGATC
GAGCGGATGG AGGCGGCGGG TGTGATCACA GGCCTGGAGG CGGTGATCGA CTGGCGGCGC
CTGGGCTTCG CGGTGGAGGT GGCCTTGCGG ATCACCTTGG ACAAGACCGA GCGCAACGCC
TTCGACACCT TCCTCGCCGC CGCCCGCGGG GTGCCGGAGG TCACGGAGAT CCAGACCTTC
CTCGGCCGGG TCGATGTGCG CCTGAACGTG CTGGCCCGCG ACATGGGGCA TTACCAGGAG
ATTTACCGCG CGCGCATCCT GACCCTGCCG CATATCGCCG ATATCGAGCA ATTGATGCTG
ATCTCGGACG TCAAGACCGA CGAGGCGCTG CCGCTGTGA
 
Protein sequence
MQIDDIDRRL LRLYQSDPTL SAAELAEAAR LPRATAWRRI ERMEAAGVIT GLEAVIDWRR 
LGFAVEVALR ITLDKTERNA FDTFLAAARG VPEVTEIQTF LGRVDVRLNV LARDMGHYQE
IYRARILTLP HIADIEQLML ISDVKTDEAL PL