| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2275 |
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| Symbol | recJ |
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| ID | 5713928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2398150 |
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| End bp | 2399907 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641268197 |
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| Product | single-stranded-DNA-specific exonuclease |
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| Protein accession | YP_001533612 |
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| Protein GI | 159044818 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGATG GTCCCGCGTT TCTCGGCGTC GAAAGCTCGC TCACCGGACG CCGCTGGATC
GGGTTGAGCC CGGACCAGGA CCGCGCGGCG GAGCGGCTTG TGCAGATCAC CGGCTTGCCG
GATGCCGTTT GCCGCACGCT TGCCCGGCGC GGAGTGGCCC CGGAGGAGGC CGAGGATTTC
CTAGCCCCTA CCCTGCGCGC GCTGCTCCCC GATCCACGCT CCCTGCGGGA CATGGAGCGC
GCAGCCGCCC GCGTGAACGC AGCCATCGCG CGGAATGAAC GGATCGCGAT CTTTGCCGAT
TACGACGTGG ACGGAGGCAG CTCGGCCGCC CTGCTGATCG ACTGGTTGCG CGCGCAGGGC
CGGACGGCAA CGCTTTATGT CCCGGACCGG ATCGACGAGG GCTATGGCCC CAACATCCCT
GCCATGGAGG CGCTTGCCGA CGCACACGAC CTGATCATCT GCGTCGACTG CGGGACCCTG
TCCCATGACC CGGTGGCGGC GGCGCAAGGG ACGGATGTGG TTATTCTCGA CCACCACCTC
GCGGAGGAAT GCCTGCCAGC GGCCCATGCC GTGGTGAATC CCAACCGGCA GGATGAGGAT
GGCAGTCTCA GCCACCTTTG CGCGGCGGCG GTGGTGTTCC TGCTGCTGGT CGAAGCGAAC
CGGCAACAGC GCGCGGCAGG TCAGCCGGGA CAGGACCTGA TGGCGCTCCT TGATCTGGTG
GCGCTTGCGA CAGTGGCCGA TGTCGCGCCG TTGTCGGGTG TTAATCGGGC CTTCGTGCGG
CAGGGGCTGA CGGTGATGGG CCGACGCGAA CGCCCGGGCC TGACCGCACT GTCCGATTCC
GCCGGACTGG ACAGGGCACC CAGTTCCTAC CACCTCGGTT TCGTGTTGGG GCCTCGGATC
AACGCAGGTG GACGGATAGG GGCGGCGGAT CTCGGAGCGC GGCTTCTGGC CACCCGCGAT
CCGCACGAGG CGGCTGCCCT CGCTGAGCGG CTAGAGAAGC TCAACGCTGA GCGGCGCGAT
ATCGAGGCCC AGGTAAGGGC CAGCGCACTG GAGCAGGCCG AAACCCGGGG CCTGAATGCA
CCGCTTGCCT GGGCCGCCGG CGAAGGCTGG CATCCAGGCG TGGTCGGCAT CGTCGCTTCT
CGCCTGAAAG AGACCGCCAA TCGGCCAGCC ATCGTGATTG GCCTTGAGGG TGACGAGGGC
AAGGGATCGG GTCGGTCAGT ACCCGGCATT GACCTCGGCG CCGCCATCCA GCGTTTGGCA
CATGAGGGGC TGCTCCTGAA GGGTGGTGGG CACAAGATGG CCGCGGGCCT GACGGTGCGC
CGTGATCTTC TGGAACCGGC CATGGCGCGG CTGTCCGAAC TACTCGCAGC GCAAGGCGCG
GATCGGTTGG GTCCCAAAGG GCTGCATGTC GACGGCGTAC TCAGCCCCCG CGCGATCACT
ACGGAGCTGA TCACCCGGAT CGAGGATGCC GGTCCCTTCG GCGCTTCTGC CCCGGCACCC
CGCTTTGCCT TGCCAAGCGT CACGATCAGA TATGCCAAGC CCGTGGGTGA GAGCCACCTC
CGCTTCAGTT TCGCGGGGCC CTGTGGCACC CGAATGGACG GCATCGCCTT CGGCGCGTTC
GATACCCCGA TCGGCCCTGC CCTTTCCCAA TCCGCACGGG GCACGTTCCA TCTCGCCGGG
CGATTGGAGA TCAACAGCTG GGGCGGACAG CACAAGGCCC AGCTGCGTCT GGACGACGCT
GCTGCTGCCG AGGCCTAA
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| Protein sequence | MTDGPAFLGV ESSLTGRRWI GLSPDQDRAA ERLVQITGLP DAVCRTLARR GVAPEEAEDF
LAPTLRALLP DPRSLRDMER AAARVNAAIA RNERIAIFAD YDVDGGSSAA LLIDWLRAQG
RTATLYVPDR IDEGYGPNIP AMEALADAHD LIICVDCGTL SHDPVAAAQG TDVVILDHHL
AEECLPAAHA VVNPNRQDED GSLSHLCAAA VVFLLLVEAN RQQRAAGQPG QDLMALLDLV
ALATVADVAP LSGVNRAFVR QGLTVMGRRE RPGLTALSDS AGLDRAPSSY HLGFVLGPRI
NAGGRIGAAD LGARLLATRD PHEAAALAER LEKLNAERRD IEAQVRASAL EQAETRGLNA
PLAWAAGEGW HPGVVGIVAS RLKETANRPA IVIGLEGDEG KGSGRSVPGI DLGAAIQRLA
HEGLLLKGGG HKMAAGLTVR RDLLEPAMAR LSELLAAQGA DRLGPKGLHV DGVLSPRAIT
TELITRIEDA GPFGASAPAP RFALPSVTIR YAKPVGESHL RFSFAGPCGT RMDGIAFGAF
DTPIGPALSQ SARGTFHLAG RLEINSWGGQ HKAQLRLDDA AAAEA
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