| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2254 |
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| Symbol | |
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| ID | 5713907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2375007 |
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| End bp | 2376164 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641268176 |
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| Product | putative polysaccharide export protein |
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| Protein accession | YP_001533591 |
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| Protein GI | 159044797 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.732758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACATTCG GCAAAACAGC TGTGCTTTCG CGTCTTGCGC GCGTGGCCCT GATCCTGGTC
ACCACCGGCG CCTTGGCAGC ATGTGGCCTG CCCCGCAGTG GTCCGGTGAA GAACGAACTC
TTCGACGCTT CGGTGTCCGA GGCTGGCAAC GCCTTCATCG TTCCAGTGAC CGACGTGGTG
GCGCAACAGA CCTTCTCTCG CCCGGCAACG GGCTTTTCCA GCAGTTTTCT GAGCGCAGGC
ACAGTGAGCC CGGACGCGAT CCGGCCCGGT GACATTCTCG GTCTGACGAT CTGGGAAAAC
GTGGTTGAGG GGCTACTTGC GCGTGGCGGC GCGGCCGCAT CTGTGATCGA ACAGGTGCAA
GTCGACAGCG CCGGTTTCAT CTTCGTGCCC TATGCTGGCC GGATCATGGC CGCCGGAAAC
ACGCCCGAAG CCTTGCGTGG CATCATCACA CGGCAACTGG AAACCCAAAC GCCCGACCCG
CAAGTCAGCG TCCGTCGGAT TGCCGGGGAC GGCGCGACGG TCACGGTCGT TGGCAACGTC
AATGGGCAGG GCGTCTACAC AATCGAACGA CCGACACGAA CCCTGTCTTC GATGATTGCC
CGGGCCGGGG GTGTGAACGC GGAATTCGCC GAATACGACA TGATCCTGGT CCGGGTCATC
CGCGGAGGCG AAATCGGCAC GATCTGGCTG ACCGATCTCT ACCGCGATCC GTCGCTGGAT
ATCGCCCTGC GCGGCGGCGA CAAGATCATC ATCGAACAGG ACCCGCGCAG CTTCATCGCA
CTGGGTGCGA CCCGTGGCCA GACCCGCGTG AACTTCGATG CCCAGGACCT GACGGCCCTA
GAGGCACTCG CCCAGGTCGG CGGTCTGGAC CCGAATCTCG CGGACCCAAC CGGAGTGTTC
ATCCTGCGCG ACGAGAGCGA AGACGTCGCC CGCACGGTTC TGGGGCGGCC GGACCTGCAA
GGTCCGCAGC GCGTCGTCTA CGTGCTCGAC CTGACACAAC CGAACGGGTT CTTCACTGCG
GAGGACTTCA TGATCAAGGA CAGTGACACG GTCTACGTCA CCGAAGCGCC AATCGCGCGT
TGGAACAAGA CTGTCAGCCT GCTGTTCGGG GCCGTGATCC AGCCAGCAGC GAATATCGAA
ACCCTGACAG CCAACTGA
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| Protein sequence | MTFGKTAVLS RLARVALILV TTGALAACGL PRSGPVKNEL FDASVSEAGN AFIVPVTDVV
AQQTFSRPAT GFSSSFLSAG TVSPDAIRPG DILGLTIWEN VVEGLLARGG AAASVIEQVQ
VDSAGFIFVP YAGRIMAAGN TPEALRGIIT RQLETQTPDP QVSVRRIAGD GATVTVVGNV
NGQGVYTIER PTRTLSSMIA RAGGVNAEFA EYDMILVRVI RGGEIGTIWL TDLYRDPSLD
IALRGGDKII IEQDPRSFIA LGATRGQTRV NFDAQDLTAL EALAQVGGLD PNLADPTGVF
ILRDESEDVA RTVLGRPDLQ GPQRVVYVLD LTQPNGFFTA EDFMIKDSDT VYVTEAPIAR
WNKTVSLLFG AVIQPAANIE TLTAN
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