Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2187 |
Symbol | rpsR |
ID | 5713840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2313936 |
End bp | 2314163 |
Gene Length | 228 bp |
Protein Length | 75 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641268109 |
Product | 30S ribosomal protein S18 |
Protein accession | YP_001533524 |
Protein GI | 159044730 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0238] Ribosomal protein S18 |
TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCAA AACCGTTTTT CCGCCGCCGC AAAGTCTGCC CCTTCTCCGG CGACAATGCA CCCAAGATCG ACTACAAGGA CACCCGGCTC CTGCAACGCT ACATCTCCGA GCGTGGCAAG ATCGTGCCGT CCCGCATCAC CGCCGTCTCG GCGAAGAAGC AGCGTGAACT GGCCCGTGCC ATCAAGCGCG CCCGCTTCCT CGCCCTGCTG CCCTATGCCG TGAAATAA
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Protein sequence | MAAKPFFRRR KVCPFSGDNA PKIDYKDTRL LQRYISERGK IVPSRITAVS AKKQRELARA IKRARFLALL PYAVK
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