Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2140 |
Symbol | |
ID | 5713136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2269849 |
End bp | 2271162 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641268062 |
Product | hypothetical protein |
Protein accession | YP_001533477 |
Protein GI | 159044683 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.387464 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTCT TTCAGATCGC GTCGCTGCTG GTGGTGATCG CCGCTCTCTT CGGTGTCATC AATCACCTGT ACCTACGCCT GCCCCCCTCG ATCGGGATCT TGCTGGTGGC GCTTGCTGCC TCGCTCTCGG TGATGGGGAT CGACGCGCTC TTTCCGCAGA GCGTCATGCG CGAGGCCGTG ACAGGAATGG TGGCGCGGCT GGAATTCTCC GACGCGCTGC TCGACGGGAT GCTGGGCCTG CTGCTCTTTG CCGGGGCGCT GCATGTGAAG ATCTCGGACC TGCGCCACGA AGGCCGCATC GTGCTGCTCA TGGCGACCCT CGGCGTGCTG ATCTCCACCG TAGTGGCGGG CGTGGGGTTC TGGGCGCTTG CGGGCGCACC GGTGCTGATC GCGCTGGTGT TCGGGGCGTT GATCTCGCCC ACCGACCCCG TCGCCGTTCT GGGCGTGTTG CGCTCAACGA ACATGCCCAA GAGCCTTGAG ACCAAGATCG CGGGCGAGAG CCTGTTCAAT GACGGGGTCG GATACGTGGT GTTCCTGATC CTCGTGGGAC TGGCCTTTCC GGCGCAGGCC CACATGGACG CGGGGTTCTT CAACGCGGTC TTTCTGTTCG TGCGGAAGGC TGGGGGCGGG GCGCTGGTCG GGCTGGTGCT GGGCTGGCTG ACCTTCAAGC TGATGGTTCG GGTGGACGAT TACGCGCTTG ACGTGATGCT GACCCTGGCA CTGGCGCTCG GAGGGTATTC GCTGTCCGTG TGGCTGGGGG TATCGGCCCC GATCATGGCC GTGGTCGCAG GGCTGATGAT CGGCGAGGTT CTGTCCGAGC ACCGCATGTC CGAGCTGACG CGGACCCAGG TCGACATGTT CTGGCACCTG ATCGACCAGA TCCTGAACGC GATCCTCTTC CTGATGATCG GGTTCGAGAT TTTCGCCGTC ACCTTCAGTC ACGCATCTTT CGGGCTGATC GTCGGCGCGA TTGTCCTGTC GCTGATCGCG CGGCTCGCGG CGGTGGCAAT CCCGCTCTAC CTCGTGCGCA GTCCCGCCGA CCTGACCCCG GAGGCGATCC CGATCATGAC CTGGGGCGGG CTGAAGGGCG GGATTTCGGT GGCGCTGGTT CTATCCCTGC CCGAAACCGA GTGGACGCAG GTGCTGCTGA CGGCGGTCTA TGTGGTCGTG ATCTTCTCGA TCGTGGTACA AGGTTTGACA GTGGCGCCAT TGGCCCGGGC GCTCAGCCGA CAGGCACGGG CCGCGCAGAA GGCCGCGCGC GCAGAGGTTG CTGGGTCGGG CACGCGGGAT ATGCAAGCAC CCCGGCAGAG GTGA
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Protein sequence | MDFFQIASLL VVIAALFGVI NHLYLRLPPS IGILLVALAA SLSVMGIDAL FPQSVMREAV TGMVARLEFS DALLDGMLGL LLFAGALHVK ISDLRHEGRI VLLMATLGVL ISTVVAGVGF WALAGAPVLI ALVFGALISP TDPVAVLGVL RSTNMPKSLE TKIAGESLFN DGVGYVVFLI LVGLAFPAQA HMDAGFFNAV FLFVRKAGGG ALVGLVLGWL TFKLMVRVDD YALDVMLTLA LALGGYSLSV WLGVSAPIMA VVAGLMIGEV LSEHRMSELT RTQVDMFWHL IDQILNAILF LMIGFEIFAV TFSHASFGLI VGAIVLSLIA RLAAVAIPLY LVRSPADLTP EAIPIMTWGG LKGGISVALV LSLPETEWTQ VLLTAVYVVV IFSIVVQGLT VAPLARALSR QARAAQKAAR AEVAGSGTRD MQAPRQR
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