Gene Dshi_2128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2128 
Symbol 
ID5713124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2258972 
End bp2259460 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content67% 
IMG OID641268050 
Producthypothetical protein 
Protein accessionYP_001533465 
Protein GI159044671 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.401537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCGC GAGTGCTGGC CTGGGCCAAC CTGTCGCTGC TGGTTCTGTT TCCCATCGCC 
TGGACCGCGC CGCTCTTGCG CGCGGGGCTG CTGCCGATCT TCGGATTGGC CGAGATTTCG
GTGCTGTCGG GGGTCGCGAG CTTGTGGGAC AGCGCCCCGG CGCTGGCCGC ACTGGTGGCG
GTGCTTGCCA TTCTTGCCCC CTATGCCAAG ACCCTGACCT TGGCGGCCGT GCAATTCGGG
CTGCTTGCGA AGAAGCCTGT CTGGCTGATC TGGCTCGGGC GGCTGGCGAT GGCGGACGTA
TTCCTGATCG CGCTCTACGT GGTCATCGTC AAAGGTGTCG GGCTGGCGCG GGTGGAGGTC
GCCTGGGGGT TGGGGCTGTT CACGGCCTGT GTTCTGGCGT CACTGCTTTT CAGCTATCTC
GCGGAGCGTC CGGGCGGTTT GACCACCGCC GCAGGATCGG GCAAGAGACA GGACCCGCAC
GGCCCGTGA
 
Protein sequence
MNARVLAWAN LSLLVLFPIA WTAPLLRAGL LPIFGLAEIS VLSGVASLWD SAPALAALVA 
VLAILAPYAK TLTLAAVQFG LLAKKPVWLI WLGRLAMADV FLIALYVVIV KGVGLARVEV
AWGLGLFTAC VLASLLFSYL AERPGGLTTA AGSGKRQDPH GP