| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2028 |
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| Symbol | |
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| ID | 5713023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2148056 |
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| End bp | 2148793 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641267952 |
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| Product | putative allophanate hydrolase subunit 1 |
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| Protein accession | YP_001533368 |
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| Protein GI | 159044574 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2049] Allophanate hydrolase subunit 1 |
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| TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.167818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGCG CTTGGCCGAA AATCCGCCCC GTGGGCCTGA CCGGCCTGCT GGTCAGCTTC
GCCGACACCC TGTCGGACCC GGCCAACCGC GCAGCCCTCG CCTTTCGCGC CGCGGTGGAG
GCGGAAGCCT GGCCAGACGT TTTGGAAAGC TCCTGCACCC TGGCCTCCTG TTTCATCCGC
TTCGACCCGG TGGAGACCGA CCCCGAGCCG CTGGAAGCGC GGCTGGCAGA TCTGCTCGCG
GCTCGCGACT GGTACGCGGC CCCGTTCCCC GCCGGGCGGC GGCTTTGGCG TATCCCGTGC
GTGTTCGGCG GCGATCTCGC CCCGCAGCTC GGGGACGCGG CGCAGGCGGC GGGCATGTCC
CCCGCCCAGG CGATCGAGAG CTTGAGCACC GCGCGCACCC GGGTCCTGAC CCTCGGCTTC
GCGCCGGGCA TGCCCTATCT CGGCACGCTG CCCCCCGCCT GGGACCTGCC GCGCCAGACC
GAGCTGACGC CCCGCGTGCC GGTGGGCGCG CTGGTGCTGG CGATCCGCCA ATTCGTGCTC
TTCGCCACCA CGGCGCCCAC GGGTTGGCGC CATGTGGGCC AGACCGCCTT CACCGGCTAC
CGCCCCGGCG CCGACCGGCC CTTCGCCCTG TGCGCGGGCG ACGAGGTGAT GTTCCCAGCG
ATCCCTGCGG AGGACTATGC CGCCTGCGAA GCCGATCCCA GCGGCCTCGG CGGCGCGACA
TGGGAGGTGC TGGAATGA
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| Protein sequence | MTGAWPKIRP VGLTGLLVSF ADTLSDPANR AALAFRAAVE AEAWPDVLES SCTLASCFIR
FDPVETDPEP LEARLADLLA ARDWYAAPFP AGRRLWRIPC VFGGDLAPQL GDAAQAAGMS
PAQAIESLST ARTRVLTLGF APGMPYLGTL PPAWDLPRQT ELTPRVPVGA LVLAIRQFVL
FATTAPTGWR HVGQTAFTGY RPGADRPFAL CAGDEVMFPA IPAEDYAACE ADPSGLGGAT
WEVLE
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