| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2013 |
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| Symbol | |
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| ID | 5713008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2132104 |
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| End bp | 2133009 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641267937 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533353 |
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| Protein GI | 159044559 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01459] HAD-superfamily class IIA hydrolase, TIGR01459
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.106645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00617633 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGACCCTGA TGACGCTGGA CCATGCGTTC GACGCCTACG AGGCGGCGCG CCCCCGCCTG
CCCCGGGCCA TCGCACCGCA CGGGACACCC GAGGCGCTGG AGAGCCTCGC GCCGCTGGCC
GACCGGTTCG ACGCCTTCCT TCTGGATGCG TTCGGGGTGC TGAATATCGG CGAGACGGCG
ATCCCCGGCG CGGTGGGGCG GGTTGCGGAC CTGCAGGCGG CGGGCAAGCG GGTGCTGATC
GTGTCCAATG CCGCCAGCGT GCCCCATGCC GCCCTGATGG AGAAATACGC GAAGCTGGGT
TTTCGGTTCG CGCCCGAGGA CGTGATCACC AGCCGCCGGA CGCTGGCCCA TCACATGGCG
GGCGGGGCGG CGGCGTGCTG GGGCGTGATG ACGCCCGAGG GCATCGCGCT GGACGATCTC
GGCCCCGGGG AGATCACGGT GCTGGGCGAC GACCCCGCGC CCTATGCGGC GGTGGACGGG
TTCCTCCTGG TGGGCAGCGC GGGCTGGAGT GCGGCGCGGC AAGCGTTGCT GGAGGGTGCC
CTGCGTGCCC GGCCGCGGCC CGTTCTGGTG GCCAATCCGG ACATCGTGGC TCCGCGGGAG
ACGGGGCTGA CCGCGGAGCC GGGGCATTTC GCCCATCAAC TCGCCGACCG GACGGGTGTC
AGCCCGCAGT TTTTCGGCAA GCCCTTCGCC AACATTTATG ACCTGGCCTT CGCGCGGCTG
GGGGATGTGG ACCGGAGCCG GGTGGTGATG GTGGGTGACA GCCTGCACAC CGACATCCTG
GGTGCACAGA CCGCACGGGT GCGCTCGGCC CTGATCACGG GCTACGGGTT CCTGGCGGGG
CGGGACGCGG GGGCCATGAT CGCGCGGTCC GGCATAATAC CTGATTTTGT TGTGGCAAGC
CCCTGA
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| Protein sequence | MTLMTLDHAF DAYEAARPRL PRAIAPHGTP EALESLAPLA DRFDAFLLDA FGVLNIGETA
IPGAVGRVAD LQAAGKRVLI VSNAASVPHA ALMEKYAKLG FRFAPEDVIT SRRTLAHHMA
GGAAACWGVM TPEGIALDDL GPGEITVLGD DPAPYAAVDG FLLVGSAGWS AARQALLEGA
LRARPRPVLV ANPDIVAPRE TGLTAEPGHF AHQLADRTGV SPQFFGKPFA NIYDLAFARL
GDVDRSRVVM VGDSLHTDIL GAQTARVRSA LITGYGFLAG RDAGAMIARS GIIPDFVVAS
P
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