| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2005 |
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| Symbol | |
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| ID | 5713000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2125127 |
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| End bp | 2126482 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641267929 |
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| Product | putative cytochrome c peroxidase |
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| Protein accession | YP_001533345 |
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| Protein GI | 159044551 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1858] Cytochrome c peroxidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0792169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATAA CCCATCGCAG ACCGGTCCGC ACCGCGTGCA TCGCGGCCTT GGTGCTCGTG
CTGCTGGCCC CGCTCGCGCG CGCCGAGGCG CTGCCGCTGC CCGACCCGGT CACCGATGCC
GACTACGCCC CGGTGGACGG CGCCGAGGCG CGCCTCGGTC AGCTGCTCTT CTACGACCCG
ATCCTGTCGG GCAACCGCGA GGTCTCCTGC GCCACCTGCC ACCACCCGGC CTTCGGGACC
TCCGACGGGC TGTCACTGGG CATCGGCGAT GGCGGCACCG GCCTCGGCCC CGCCCGCCGC
GCCGATCCCG ACAACCCGCC CGAACAACGC ATCCCCCGCA ACGCGCCCGC ACTCTTCAAC
CTCGGCGCCC ACGAGTTCAC GGTGCTCTTC CACGACGGCC GGATCGAGAC CGACCCGGAT
CGCCCCGGTG GGTTGCGCAC CCCGCTCGAC GCCGACATGG TCGCGGGCTT CGCATCGCTC
CTGTCGGCGC AAACCATGTT CCCGGTGCTC AGCGCCGACG AGATGGCCGG CCACTATGGC
GAGAACGAGA TCTCCACCGC CGTGCGCCAG GGCCGCCTCA CCGGGCCGGG CGGCGCCTGG
GACCTGATCT CCCGCCGGGT GGCGGCGATC CCCGCCTATG GGAAGGCATT CGCGCGGGTC
TACCCGCAGA TATCCGCGCC CGACCAGATC GCCTTCACCG ACATCTCCAA CGCCATCGCC
GCCTTCATGG CCTTCGAGTT CCGCTCCGAC ACCAGCCCGT TCGACGCCTA CCTGCGCACG
GGCCAGGGGC TGGACGCGGC CCAGGGGCGC GGCATGGCGC TGTTTTACGG TACCGCTGGC
TGTGCGGCCT GCCACGCGGG AAAATTCCAG ACCGACCACG GGTTTCACGC CATGGCGGCG
CCGCAGATCG GGCCGGGCAA GTCTGCACGG TTCGAAACCC ACGCCCGCGA CGAGGGCCGG
ATGCGCGTGA CCGGGCGGGC GGCGGATGCC TATGCCTTCC GCACCCCCTC CCTGCGCAAT
ATCACCCGCA CCGCGCCCTA CGGCCATGCG GGCGCGCACC GGGATCTCGG GGCGTTCCTG
CGCCACCATA TCCGGGCCGA TGGCGGGGCA GGGCGGTTCG ATCCGAAAGG GACAGTGCTG
CCCGACCTCG CCGTTTCCGA TTTCCGCGTC ATGACGGACC CGGCGCAGCA GGCCGAGATC
ACGTCCGCGC GGACAATCGA AGGCCCGGTC TTGTCAGAGG CGGAGATCGC CGACCTCATG
GCCTTTCTCG GCGCTCTCGA AGACCCGGGC GCGCTCAAGG GCCGCCTCGG CATCCCCGCC
GCCGTGCCCA GCGGCCTTCC CGTCGCCCGG CCCTGA
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| Protein sequence | MQITHRRPVR TACIAALVLV LLAPLARAEA LPLPDPVTDA DYAPVDGAEA RLGQLLFYDP
ILSGNREVSC ATCHHPAFGT SDGLSLGIGD GGTGLGPARR ADPDNPPEQR IPRNAPALFN
LGAHEFTVLF HDGRIETDPD RPGGLRTPLD ADMVAGFASL LSAQTMFPVL SADEMAGHYG
ENEISTAVRQ GRLTGPGGAW DLISRRVAAI PAYGKAFARV YPQISAPDQI AFTDISNAIA
AFMAFEFRSD TSPFDAYLRT GQGLDAAQGR GMALFYGTAG CAACHAGKFQ TDHGFHAMAA
PQIGPGKSAR FETHARDEGR MRVTGRAADA YAFRTPSLRN ITRTAPYGHA GAHRDLGAFL
RHHIRADGGA GRFDPKGTVL PDLAVSDFRV MTDPAQQAEI TSARTIEGPV LSEAEIADLM
AFLGALEDPG ALKGRLGIPA AVPSGLPVAR P
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