| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1829 |
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| Symbol | |
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| ID | 5712820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1909208 |
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| End bp | 1910602 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267752 |
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| Product | putative FAD-dependent oxidoreductase |
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| Protein accession | YP_001533172 |
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| Protein GI | 159044378 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.226522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACACA GACCGAAGCA CTGGCCCAAG GCCAGCTACG ATCCACGCTA CGATCCGATC
ATCGACGCGG GCCCGGGGCA TAACCGGGAC CACGCGCCGA CCTACTGGAT CGACACCGCG
GGCACCCCGC CCGAGGATGA CGGCCCGATC ACGGGGGATA TCGACGCCGA CGTGGTGGTC
GTGGGCTCCG GCTATACCGG GCTATCCACG GCGATCCACC TGGCCAAGGA GCATGGCATC
AAGGCCCATG TTCTCGAAGC CAACACCGTT GCCTGGGGCT GCTCCACCCG CAATGGCGGG
CAGGCGCAGA TCTCGTCCGG CCGCCTCAAG CGGTCCGAGT GGATCAAGCG CTGGGGCGTC
GAGGTCGCCA AGGACATGCA CGCCGAAGTC TGCGAGGCGT TCGAGCTGTT CAACGACCTG
ATCGGGTCCG ACGACATCGA CTGCGATCCG CAGACGGGGG GCCATTTCTA CACCGCCCAC
CGCGACAAGG TCATGCCGAA GCTGGCCAAG GAATGCGCCG TGCTCAACGA CGTGTTCGGC
TACGGCGCGC GCATGGTGTC CCGCGCGGAG CTGCACGAGA GATACGTGCG CGACCAGGAG
GCCCACGGCG CCCTGTGGGA GCCTGACGGC ACCTCGGTGC ACGCCGCCAA GCTGGCCTTC
AGCTATGTCC GGCTGGCGCG CAAGCTCGGG GCCAAGATCC ATACCGCCAG CCCGGTCATG
GGCTGGAAGA TCGTCGACGG CGTGCATCAC CTGACCACAC CGGGCGGGAC CGTGCGCGCG
CGTGCGGTGG CGCTGGCCAC GGCCGGCTAC ACTCCGCCGG GGCTGAACGA GAAGACCAAG
CACCGGCTGA TGCCGATCCT GTCCAACTCC ATCGTGACGC GTCCGCTGAC CGATGACGAG
AAGGCCGAAT GCGGCTTCCA GGTGAAATCG CCCCTGACCG ACACCCGGAC CTTGCGGCAT
TACTACCGCT TCCTGCCCGA TGGCCGCGTC CAGATCGGCA GTCGCAGCGC CATCACGGGC
CCGGATGCGG AGAACCCCAA GCACCTGGAT CTGCTGCAAA AAGGGCTCTA CCGCAAGTTC
CCGGCGCTCG AAGGCATCGA GCTGGATTAC TCCTGGTGGG GATGGGTGGA TGTCAGCCAC
GACATGATGC CCCGCATCTT CCAGCCCGAC CCGAAGCAGA CGATCTTCTA CGCGATGGGC
TATGGCGGCA ACGGGGTCAT GTACTCCGCA CAGGCCGGCA AGCGCATGGC GCAGATGGTG
GCGGGGCAGG GCCGGGAGCT GAAGCTGCCG ATCTTCACCT CGCAACTGCC GAGCCACGGC
ATCCTCACCC CCTTCCGCAG GTTGGGCCAG CGGATCGCCT ATCCCTACTA CTACGTACGC
GACGAAATTC TCTGA
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| Protein sequence | MPHRPKHWPK ASYDPRYDPI IDAGPGHNRD HAPTYWIDTA GTPPEDDGPI TGDIDADVVV
VGSGYTGLST AIHLAKEHGI KAHVLEANTV AWGCSTRNGG QAQISSGRLK RSEWIKRWGV
EVAKDMHAEV CEAFELFNDL IGSDDIDCDP QTGGHFYTAH RDKVMPKLAK ECAVLNDVFG
YGARMVSRAE LHERYVRDQE AHGALWEPDG TSVHAAKLAF SYVRLARKLG AKIHTASPVM
GWKIVDGVHH LTTPGGTVRA RAVALATAGY TPPGLNEKTK HRLMPILSNS IVTRPLTDDE
KAECGFQVKS PLTDTRTLRH YYRFLPDGRV QIGSRSAITG PDAENPKHLD LLQKGLYRKF
PALEGIELDY SWWGWVDVSH DMMPRIFQPD PKQTIFYAMG YGGNGVMYSA QAGKRMAQMV
AGQGRELKLP IFTSQLPSHG ILTPFRRLGQ RIAYPYYYVR DEIL
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