| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1765 |
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| Symbol | |
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| ID | 5713332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1830691 |
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| End bp | 1832526 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641267683 |
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| Product | putative multidrug export ATP-binding/permease protein |
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| Protein accession | YP_001533108 |
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| Protein GI | 159044314 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.193785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGGTG CCCGGCTTTC CGATCCTCCC CCTGAAGACC TCGAGAACCG TCGCCGCGGT
CTGTTGGTGA TCCGCAAGGT GGCGCCGTAT CTGTGGCCCG ATGACAAGCC TTGGGTGAAG
CGGCGTGTGG TGCTAGCGAT GGCGGCACTG TTCCTGGCCA AGCTGATCGC GGTGGGCACG
CCGTTCTTGT ACAAAACCGC CGTCGACTCC CTCGCGGGGG AGGTGTCGGA CGGTGTGCTT
CTGGCGATCG GGGCGGTGGG GCTGACCATC GCCTATGGCA TGGCGCGGCT GATGACCGTC
GGCTTCCAGC AGCTGCGCGA CGTGATCTTT GCCAAGGTCG CGCAGCGGGC CCTGCGGACC
TTGGCGCTGG AGACCTTCAC CCATATCCAC CGGCTTTCGA TGCGCTACCA CATCACGCGC
AAGACCGGGG GGCTGAGCCG GATCATCGAG CGCGGGGTGA AGGGGGTCGA ATTCCTGCTG
CGGTTCCTGC TGTTCTCCAT CGGGCCGCTG ATCCTGGAAC TGGCGCTGAT CTCAATCATT
CTGACGCTCT ATTTCGACGC CTGGTACCTG GCGGCGGTGG CGGGGACCAT TGCGCTCTAT
GTCGGGTTCA CCTTTAAGGT GACGGAATGG CGGGTGCGCA TCCGGCGAGA GATGAACCGT
CAGGACACCG ATGCCAACCA GAAGGCCATC GACAGCCTGC TGAATTTCGA GACGGTGAAG
TATTTCGGCG CCGAGACGCG GGAGGCGGAG CGCTACGACG CGGCAATGGA GGGCTATGAG
GCAGCAGCGC TCAAGACCTC CTACACGCTG GGGTTCCTGA ATTTCGGCCA ATCGGTGCTG
ATCACCGGGG GGCTGGTCGT CGTCATGGTC ATGGCCGCGA TGGGAGTGCA GCGCGGGGAT
CTGACCGTGG GTGATTTCGT CATGGTCAAT GCGTACATGT TGCAGATCAC GCAACCGCTG
AACTTTCTCG GCACCGTCTA CCGCGAGATC CGTCAGGCAC TGATCGACAT GGGCGAGATG
TTTGAGCTGC TGGAGCAGCC AGCCGAGGTG CAGGACAAGC CCGGCGCGCA CGACCTGCGG
GTCACCGGGG GGGAGATCGT GCTCGACGAT GTGGTCTTCG GCTATGACCC GGCGCGGCCG
ATCCTGAAGG GTGTGAGCCT GCGTGTCGGA GCGGGACAGA CGCTGGCGCT GGTGGGACCG
TCGGGGTCGG GCAAGTCGAC CATCGGGCGG CTCCTGTTCC GGTTCTACGA TGTAAGCGAG
GGCGCGCTGC GGATCGACGG GCAGGATGTG CGCGACGTCA CCCAGGACAG CCTGCATGCG
CAGATCGGCG TGGTGCCGCA GGACACGGTG CTGTTCAACG ACACGATCCT CTACAACATC
GCCTATGGCC GCCCCGAGGC CAGCCGGTCC GAGATCGAGG CCGCGGCGAA GGCGGCGGAG
ATCCACGAAT TCATCTACAG CCTGCCCGAG GGCTACGAGA CCAAGGTGGG CGAGCGGGGG
CTCAAGCTTT CGGGCGGGGA AAAGCAGCGC GTGGGCATCG CGCGGACCCT GCTGAAGAAC
CCGCCGATCC TGCTGCTGGA CGAGGCGACC TCGGCGCTCG ACAGCGAGAC GGAGCGGGAC
ATCCAGGACA GTCTGGCGGC CATGGGGCAG GGGCGCACGG TGATCACCAT TGCGCACCGT
CTGTCCACGG TGGTCGATGC GGACCGGATC GTGGTGCTGG AGAACGGCGT GATCGTCGAA
GAGGGCACCC ATGACGAGCT GCTGGCCCGG GGCGGGCGCT ATGCCTCCAT GTGGACCCGG
CAGCAAAGCG AAGATGCCGA AGAGGACGCG GCCTGA
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| Protein sequence | MRGARLSDPP PEDLENRRRG LLVIRKVAPY LWPDDKPWVK RRVVLAMAAL FLAKLIAVGT
PFLYKTAVDS LAGEVSDGVL LAIGAVGLTI AYGMARLMTV GFQQLRDVIF AKVAQRALRT
LALETFTHIH RLSMRYHITR KTGGLSRIIE RGVKGVEFLL RFLLFSIGPL ILELALISII
LTLYFDAWYL AAVAGTIALY VGFTFKVTEW RVRIRREMNR QDTDANQKAI DSLLNFETVK
YFGAETREAE RYDAAMEGYE AAALKTSYTL GFLNFGQSVL ITGGLVVVMV MAAMGVQRGD
LTVGDFVMVN AYMLQITQPL NFLGTVYREI RQALIDMGEM FELLEQPAEV QDKPGAHDLR
VTGGEIVLDD VVFGYDPARP ILKGVSLRVG AGQTLALVGP SGSGKSTIGR LLFRFYDVSE
GALRIDGQDV RDVTQDSLHA QIGVVPQDTV LFNDTILYNI AYGRPEASRS EIEAAAKAAE
IHEFIYSLPE GYETKVGERG LKLSGGEKQR VGIARTLLKN PPILLLDEAT SALDSETERD
IQDSLAAMGQ GRTVITIAHR LSTVVDADRI VVLENGVIVE EGTHDELLAR GGRYASMWTR
QQSEDAEEDA A
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