| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1762 |
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| Symbol | |
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| ID | 5713329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1825196 |
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| End bp | 1828603 |
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| Gene Length | 3408 bp |
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| Protein Length | 1135 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267680 |
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| Product | indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | YP_001533105 |
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| Protein GI | 159044311 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.614187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGC AGGATATCCG ACTGAGCGAC CGGTACGATC TTGATCGCGA GACCGTGCTG
CTCAACGGCA CGCAGGCACT GGTGCGTCTC ACGCTGATGC AGGCGGCCCG CGACCGGGCG
GCGGGGCTGA ACACCGGCGG TTATGTCACC GGCTATCGCG GCTCGCCCCT GGGTGCGGTG
GACCAGCAGA TGGGCCGCAA CCTTGACCTT CTGCGCGAGG CTGGGGTGAT TTTCGAGCCC
GGGCTGAACG AGGATCTGGC GGCCACGGCC CTCTGGGGCA CGCAGCAGGC CGAGCTGCGC
GGCGAGGGCA GCCGGGATGG TGTCTTCGGG ATGTGGTACG GCAAGGGGCC TGGGGTGGAC
CGGTCCGGCG ACGTGATGAA GCACGCCAAC CTCGCGGGCA CCTCGCCCCA TGGCGGGGTG
TTGTTCGTGA TGGGGGACGA TCATACCGGC GAAAGCTCCA CCACCTGTCA TCAGTCTGAA
TTCGCGCTGC TCGATGCCTA CATGCCTGTG CTGTCGCCCG CCGGGGTGCA GGAGATCCTG
GATTACGGGC TCTTTGGCTG GGCGCTGAGC CGGTATGCCG GGGTTTGGGT CGGGCTGAAG
GCGATGAAGG ACACGGTGGA GGCCACGGCG GTCGTGGACG GGCGGGCGGA TCGGATGCGA
TTCGTCACAC CGGACTACGC GATGCCCGAG GGCGGGCTGA ACATACGGCT GGTGGACCAT
TGGACCCCGC AGGAAGAACG CCTGATCGCC CATAAGCGCT ACGCTGCCGA GGCGTTCGGC
CATGCCAACG GGATCGACAA GCGTATGCTG GGCAAGCCGG GGGCGAAGAT CGGGTTCCTC
GCGGCGGGCA AGAACTGGCT CGATCTGGCC CATGCGCTCG ACCTGCTAGG CATCGACGGC
GCGCGGGCCG AGGCACTGGG GATCACCGCC TACAAGGTGG GCATGACCTG GCCGCTGGAT
GTGAAGGGGT TTCTGGGTTG GGCCGAAGGG CTCGATGTAA TCGTAGTGGT GGAGGAAAAG
CGCAAGCTGC TGGAGGTGCA GGTCAAGGAG GCGATCTTCA ACGACCGGCG CGGGCGGCGG
GTCTACGGCG GCCAGAAAGC GCCGGGCGAG GTGCTGTTCC CGGCCTATGG CGCGCTCGAT
CCGGTGACGA TTGCCGAGAA GCTCGGGCAG ATCCTGATCG AGGAGGGGCG CGCGTCCGAG
GACCTGGAGG CGCGGCTTGC GCGGCTGGCG GAGGTGCGGC GGGCCGACAA CGCCAAGGAC
CTGGCGGCGC GCACGCCCTA TTTCTGCTCG GGCTGTCCGC ATAACACCTC GACCCGGGTG
CCGGAGGGCG CGATCGCCTA TGCGGGGATC GGTTGTCATG TCATGGCCAT GTGGATGGAC
CGTGACACCA ACGGATACAC CCATATGGGG GCCGAAGGGG CCAACTGGAT CGGGGAGGGG
AAGTTTTCGA CCCGTTCGCA TGTGTTCCAG AACCTCGGTG ACGGCACCTA CAACCATTCG
GGCATCCAGG CGATCCGTGC GGCCCATGCG GCCAAGGCCA ACATCACCTA CAAGATCCTG
TTCAACGACG CGGTGGCGAT GACCGGGGGA CAGACCAATG ATGGCGGCCT CGATGCGGCC
CGCATCGCGT GGGAGCTGAA GGGGATCGGG CTGCGCGATA TCCGGATCGT CTATGACGAG
AAAGAAGAGG TCGATTTTTC CGCCTTTCCG CCGGACCTGC CGCGCCATGG CCGCGACGAA
CTGATGACCG TGCAGGAGGA GTTGCAACAG GTGCGCGGCA CCACGGCGAT CCTCTATATC
CAGACCTGTG CCGCCGAGAA GCGCCGACGC CGCAAGCGGG GCACATTCCC CGACCCGGAC
AAGCGCGTGT TCATCAACAC GGATGTCTGC GAAGGTTGTG GCGATTGCGG GGTGCAGTCG
AACTGCGTTG CCATCGTGCC CGCAGAGACC GAACTGGGCC GCAAGCGGGC CGTGGACCAG
TCGGCCTGCA ACAAGGATTT CAGCTGTCTC AAGGGGTTCT GCCCGTCCTT CGTCACCGTC
TCTGGCGCGC GCCCGCGCAA GGCCGCCACG GCGGAGGTCG ACCTGGGGCA TCTGCCCGAC
CCGGCGCTGC CTGCGATCGA CGGCACCCAC AACCTGCTGA TCACCGGGGT CGGTGGCATG
GGGGTCGTGA CCATTGGCGC GACGCTTGCC ATGGCCGCGC ATCTGGAGGG CAAGGGCGTC
GGCATGATGG AGATGGCGGG CCTCGCCCAG AAGGGTGGCG CGGTGCAGAT CCATTGCCGC
ATCGCCGCGC GGCCCGAGGA TATTACGGCC GTGCGCGTCT CGGTCGGCGA GGCGCACGGG
GTGATCGGCG GCGACCTGGT GGTCACGGGC GCGGGCAAGA TACAGGGCAT GATGGCCAAG
GGCCGTACCG GCGCCGTGGT CAACAGCCAC GAGATCGTGA CCGGCGCCTT CACCCGCGAC
CGCGAATTCC GCATTCCCGG CGCGGACCTG CAGGTCTCGT TGCAGGCGCG GCTGGGGGCG
GAAGCGGTGG TGTTCTTTGA TGCCTCGGAA CTGGCGCAGA AGGTGCTGGG CGATGCGATC
TTCTCCAACA TGGTGGTCAC CGGTGCGGCT TGGCAGCGGG GGCTGATCCC GCTGGGACGC
GACGCGATCT TCCAGGCGAT CAAGCTGAAC GGGGCCGCAC CGGATCGGAA CAAGCAGGCG
TTCGATTTGG GGCGCTGGGC GGTGCTGAAC CCCGAGGCGG TCGCCAAGAT GCTGGCGGCG
GAGGTGACCG CGCGGCCGAA ATCCCTTGCG GAAAAGATCG ACTTCCGCGC GGACCACTTG
CGCGCCTACC AATCCGCGCG GCTGGCGAAG AAGTACCGCC GTGCGGTGGA GGCTGTCACC
GACCCGGACC TGCGTGCGGT GGTGGCGCAG AACTACCACA AACTCCTGTC CTACAAGGAT
GAATACGAGG TTTCGCGCCT CTTGCGCGAC ACCCGCGCCA AGGCCGAGGC GGCCTTCGAG
GGGGAGCTGG AGCTGACCTA TCATCTGGCG CCGCCGCTTT TGTCCCGTGC GGGGCCTGAC
GGGCGACCGC GCAAGCGGGC TTTCGGTTCG TGGATCGAAA AGGCTTATGG CCCGCTGGCA
GCGCTCAAGC TGCTGCGGGG CACGCCGCTG GACCCGTTCG GTTACACCGC CGAGCGGCGG
ATGGAGCGGG AGTTGATCCG GCTCTACGAG GCCGATCTGG CCCGGGTGCA GGCCGAGATG
ACCCCGGCGC GGGCCGAGGC GGCGCGCGCG CTGCTGGCCT GGCCCGACAT GGTGCGCGGG
TTCGGTCCAG TGAAGGCCCA GGCGGTGGAG ACGATGCGCG CCAGGCGCGC GGAGCTGTGG
GCGGCCTTCG AGGCGGCGGA GGACGCGGTG GCGCAGGCCG CCGAATAG
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| Protein sequence | MSLQDIRLSD RYDLDRETVL LNGTQALVRL TLMQAARDRA AGLNTGGYVT GYRGSPLGAV
DQQMGRNLDL LREAGVIFEP GLNEDLAATA LWGTQQAELR GEGSRDGVFG MWYGKGPGVD
RSGDVMKHAN LAGTSPHGGV LFVMGDDHTG ESSTTCHQSE FALLDAYMPV LSPAGVQEIL
DYGLFGWALS RYAGVWVGLK AMKDTVEATA VVDGRADRMR FVTPDYAMPE GGLNIRLVDH
WTPQEERLIA HKRYAAEAFG HANGIDKRML GKPGAKIGFL AAGKNWLDLA HALDLLGIDG
ARAEALGITA YKVGMTWPLD VKGFLGWAEG LDVIVVVEEK RKLLEVQVKE AIFNDRRGRR
VYGGQKAPGE VLFPAYGALD PVTIAEKLGQ ILIEEGRASE DLEARLARLA EVRRADNAKD
LAARTPYFCS GCPHNTSTRV PEGAIAYAGI GCHVMAMWMD RDTNGYTHMG AEGANWIGEG
KFSTRSHVFQ NLGDGTYNHS GIQAIRAAHA AKANITYKIL FNDAVAMTGG QTNDGGLDAA
RIAWELKGIG LRDIRIVYDE KEEVDFSAFP PDLPRHGRDE LMTVQEELQQ VRGTTAILYI
QTCAAEKRRR RKRGTFPDPD KRVFINTDVC EGCGDCGVQS NCVAIVPAET ELGRKRAVDQ
SACNKDFSCL KGFCPSFVTV SGARPRKAAT AEVDLGHLPD PALPAIDGTH NLLITGVGGM
GVVTIGATLA MAAHLEGKGV GMMEMAGLAQ KGGAVQIHCR IAARPEDITA VRVSVGEAHG
VIGGDLVVTG AGKIQGMMAK GRTGAVVNSH EIVTGAFTRD REFRIPGADL QVSLQARLGA
EAVVFFDASE LAQKVLGDAI FSNMVVTGAA WQRGLIPLGR DAIFQAIKLN GAAPDRNKQA
FDLGRWAVLN PEAVAKMLAA EVTARPKSLA EKIDFRADHL RAYQSARLAK KYRRAVEAVT
DPDLRAVVAQ NYHKLLSYKD EYEVSRLLRD TRAKAEAAFE GELELTYHLA PPLLSRAGPD
GRPRKRAFGS WIEKAYGPLA ALKLLRGTPL DPFGYTAERR MERELIRLYE ADLARVQAEM
TPARAEAARA LLAWPDMVRG FGPVKAQAVE TMRARRAELW AAFEAAEDAV AQAAE
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