| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1740 |
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| Symbol | gap2 |
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| ID | 5713307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1807000 |
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| End bp | 1808001 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267658 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_001533083 |
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| Protein GI | 159044289 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.168676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.735809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGATTA CAGTTGGAAT CAACGGATTT GGCCGCATCG GTCGCTGCAC CCTGGCGCAT
ATCGCGGAAA GCGCGCGCAA CGATGTGCAG GTGGTCAAGA TCAACGCCAC GGGTCCGATC
GAAACGAATG CGCATCTGCT CAAGTATGAC AGCATCCATG GCCGGTTCGG CGGCACGGTC
ACGGTGGATG GCGACCACAT GGACCTGGGC CGCGGACCGA TGAAGGTGTT CTCCACCTAT
GATCCGACGG AGCTGGACTG GTCCGGGGTG GACGTGGTGC TGGAATGCTC GGGCAAGTTC
AACGCCCGCG ACAAGGCGGC GGTCCATCTG GACCACGGCG CCAAGCGTGT GCTGGTCTCC
GCCCCTGCCA AGAACGCCGA CAAGACCATC GTCTACGGGG TGAACCACCG CAGCCTGACC
AAGGACGATC ACGTGGTCTC CAACGCCTCC TGCACCACCA ACGGGCTGGC CCCGCTGGCC
AAGGTCCTCA ACGACGCGAT CGGGATCGAG CGTGGCATCA TGACCACGAT CCACAGCTAT
ACCGGAGATC AGCCGACGCT GGACCGGCGG CATTCCGACC TGTACCGCGC TCGCGCTGCG
GCCATGGCGA TGATCCCCAC CTCCACCGGG GCGGCGAAGG CCATCGGCGA GGTGATCCCC
GAACTCGCCG GCAAGCTCGA CGGCACCGCC CTGCGGGTGC CCACGCCGAA CGTCTCGGCG
GTGGACCTGA CCTTCGAGGC GGGCAAGGAT GTGACCGTCG AGGACGTGAA CGAGATCGTG
CGCGAGGCGG CCCAGGGCCA TATGGGCGCG GTTCTGGCCT ATGACCCGGA GCCGAAGGTG
TCGATCGACT TCAACCACAC CACCCATTCC TCGATCTTTG CACCGGACCA GACAAAGGTT
ATCGGGGGAC GGACCGTGCG GGTTCTGGCA TGGTACGACA ATGAATGGGG CTTCTCTTGC
CGCATGGCGG ACACCGCCGC GGCCATCGGA CGCCTGATCT GA
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| Protein sequence | MTITVGINGF GRIGRCTLAH IAESARNDVQ VVKINATGPI ETNAHLLKYD SIHGRFGGTV
TVDGDHMDLG RGPMKVFSTY DPTELDWSGV DVVLECSGKF NARDKAAVHL DHGAKRVLVS
APAKNADKTI VYGVNHRSLT KDDHVVSNAS CTTNGLAPLA KVLNDAIGIE RGIMTTIHSY
TGDQPTLDRR HSDLYRARAA AMAMIPTSTG AAKAIGEVIP ELAGKLDGTA LRVPTPNVSA
VDLTFEAGKD VTVEDVNEIV REAAQGHMGA VLAYDPEPKV SIDFNHTTHS SIFAPDQTKV
IGGRTVRVLA WYDNEWGFSC RMADTAAAIG RLI
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