Gene Dshi_1703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1703 
Symbol 
ID5713269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1771939 
End bp1772436 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID641267620 
Productputative zinc uptake regulation protein 
Protein accessionYP_001533046 
Protein GI159044252 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0261954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0208783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCGG AAAATGCGGC CCCGATCGGG TTCGAGAAGC ACGACCACGG TGCCTGTGTC 
AGCCAGGCGC TTGCGGCGGC CGAGGCGCGT TGTGCCGCCG AAGGGCTGCG TCTGACGCCG
GTGCGGCGCA AGGTGCTGGA GCTTCTGTTG CGCGAGCATC GGGCACTTGG GGCCTATGCG
ATCCTCGATC TTCTGCGGGA GGCGGGGTTC GGTTCCCAGC CGCCGGTGGC GTACCGGGCG
CTCGATTTCC TGTCCGAGCA CGGGTTCGTG CACAAGATCG AGCGGCTCAA TGCCTTCGTG
GCCTGCGCCC ATCCGACCGA GCGGCATTCG CCCGCCTTCA TGATCTGCAG GCTGTGCGAC
GCGGTGGCGG AGGCGCAATC GCCGCCCTCG CGCGGGGCGC TGGGGGCGGC GGCGAAGGCG
GCAGGGTTCC AGATCGAGAA GACCGTGGTG GAGGCGGAGG GCCTGTGCCC GGCCTGCATC
GAAAAGGCTG ACGCATGA
 
Protein sequence
MSAENAAPIG FEKHDHGACV SQALAAAEAR CAAEGLRLTP VRRKVLELLL REHRALGAYA 
ILDLLREAGF GSQPPVAYRA LDFLSEHGFV HKIERLNAFV ACAHPTERHS PAFMICRLCD
AVAEAQSPPS RGALGAAAKA AGFQIEKTVV EAEGLCPACI EKADA