Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1682 |
Symbol | pgi |
ID | 5713248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1750801 |
End bp | 1752405 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641267599 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_001533025 |
Protein GI | 159044231 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0419793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.180807 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGTTT GGCAACGCTT GAGCTTTCAC CATGACCGCA CGCGGGATCG CAGGATCCTC GACCTGTTCG ACGATCCCAA GCGGGCCGAG GGGTTTTCTG CTCGGCTCGG GGACATGCTT TTCGATTATT CCAAGACCAA TATCGACCTG GCAGGACGTG ATTTGCTGCT TGCGCTGGCC GAAGACGCAG GAGTCGCCGC GCGGCGCGAG GCGATGTTCG CGGGCGAACC CATAAACGAG ACCGAGGGGC GCGCGGTGTT GCACACGGTC CTGCGCAATC TTGATGCGTC GGTCGTGGTC GATGGCACGG ACGTGATGCC GGAAGTGCGC GACACGCATG CGCGGATGGT GGCGTTCTGC AAGGATGTGC GGTCGGGCGC CTACACCGGG CAGGGCGGCA GGATCACGGA TGTGGTCAAT ATTGGCATTG GTGGCTCGGA CCTGGGGCCC GCCATGGCGG CGATTGCCCT GTCACCCTAT GCGGACGGGC CGCGGGTGCA TTTCGTGTCC AATGTGGACG GGGCACAGAT CGCAGAGACG CTGGCGCCAT TGGATCCGAC CACGACGCTG GTGATCGTGG CCTCCAAGAC CTTCACCACC ATCGAGACCA TGACCAATGC GGAGACCGCG CGGGCCTGGA TGAAATCCGC CGTGGACCTG CCCGCGATGC AATTTGCCGC CGTGTCCACC AGTGCGGAGC GGACGGCGGC CTTCGGGATC ACGCCAGAGC GGGTGTTCGG CTTCGCCGAT TGGGTGGGGG GGCGGTATTC GATGTGGGGG CCGATCGGAC TGAGCCTGAT GCTGTCGGTG GGGCCGGAGA ATTTCGACGC GTTCCTCGCC GGGGGGGCGG CGATGGATGC CCATTTCCGC ACCGCGCCCC TTTCGCAGAA CATTCCGGTT ATGCTGGCGC TGGTGGGTAT CTGGCACCAC CAGATCTGTG GTCATGCGAC GCGCGCGGTG CTGCCCTATG ACCAGCGGTT GTCGCGGTTG CCGGCGTACC TTCAGCAGTT GGAGATGGAG AGCAATGGCA AGCGCGTGGC GATGGATGGC GCGACCCTGG AGCGGACAGC GGGCCCGGTG GTCTGGGGCG AGCCGGGGAC CAACGGCCAA CACGCGTTCT ACCAGCTGAT CCACCAGGGG CAGCAGGTGG TGCCTTGCGA GTTTCTGCTG GCCGCCCAGG GGCATGAGCC TGATCTGGTT CGGCAGCATC AGTTGCTGGT CGCCAACTGC CTCGCGCAGT CCGAGGCGTT GTTACGCGGG CGCAGCCTCG AGGAAGCGAC CGCGCGGATG GCGGACCAGG GGCTGAGCGG TGCGGAGCTG GATCGGCAGG CACGGCATCG CGTGTTCCCG GGCAACCGGC CGTCCACGAC GCTGATCTAT CCCAAGCTGA CGCCCTTCGT TCTGGGCCAG ATCATCGCGC TCTATGAGCA TCGGGTGTTC GTGGAGGGGG CGATCCTCGG CATCAACTCC TATGATCAGT GGGGGGTTGA GTTGGGCAAG GAACTCGCCA CCGCGCTTGG CCCGGTGGTC ACTGGCGAGG TCTCGGCAGA GGGCAAGGAC GGCTCGACCC GGGCCCTGGT CGAATTTGTG CGCGCTCACG CCTGA
|
Protein sequence | MSVWQRLSFH HDRTRDRRIL DLFDDPKRAE GFSARLGDML FDYSKTNIDL AGRDLLLALA EDAGVAARRE AMFAGEPINE TEGRAVLHTV LRNLDASVVV DGTDVMPEVR DTHARMVAFC KDVRSGAYTG QGGRITDVVN IGIGGSDLGP AMAAIALSPY ADGPRVHFVS NVDGAQIAET LAPLDPTTTL VIVASKTFTT IETMTNAETA RAWMKSAVDL PAMQFAAVST SAERTAAFGI TPERVFGFAD WVGGRYSMWG PIGLSLMLSV GPENFDAFLA GGAAMDAHFR TAPLSQNIPV MLALVGIWHH QICGHATRAV LPYDQRLSRL PAYLQQLEME SNGKRVAMDG ATLERTAGPV VWGEPGTNGQ HAFYQLIHQG QQVVPCEFLL AAQGHEPDLV RQHQLLVANC LAQSEALLRG RSLEEATARM ADQGLSGAEL DRQARHRVFP GNRPSTTLIY PKLTPFVLGQ IIALYEHRVF VEGAILGINS YDQWGVELGK ELATALGPVV TGEVSAEGKD GSTRALVEFV RAHA
|
| |