Gene Dshi_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1670 
Symbol 
ID5713235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1738922 
End bp1739893 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content70% 
IMG OID641267586 
Producthypothetical protein 
Protein accessionYP_001533013 
Protein GI159044219 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0547] Anthranilate phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0478591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.302071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCG CGTCTTATAT CGCCATCGTG GCCCGCGGCC CGGGCCGTGC GCGACCGTTG 
ACCGAGACGG AGGCGCGCGC GGCCATGGGC CATGTGCTGG ACGGCACCGG CGCTGCGGAG
GCCGTGGGCG CGCTCCTGAT GACCCTGCGG CTGCGCGGGG AAACCGAGGA CGAGATCACC
GGATTCGCGG GCGCTTTGCG CGACCACATG CAGCGATGGC GCGCGTTGGA CGTCGATCTC
GATTGGCCCA GCTACTCGGC GGGACGCACG CGCGGGTTGC CATGGTATCT GCTGAGCGCA
CGGCTCGTGG CCCAGGCGGG CTACCGGGTG ATGCTCCACG GGCGCAATGG GGGTGATGCC
GCCTTGCGCA GTTATCTTGC GGCGCAAGGT GTGGCCATCG CGCAGACTCC CGCCGCGGCC
ACCGCAGCTC TCGACGCGTC CGGCCTCGTC TATATCCCGC TGGAGGCGCT ATCGCGTCGG
ACCACGGACC TGCTGGCACT GCGCGCGCAT CTGGGCCTGC GCTCCTGCGT CAACACGTGT
CTGCGCGTGG CAAACCCAGC GGGCGCCCGA GTGACCGTCC AGGGCGTGTT CCACCCACCC
TACCGCGCCC TGCAGGAAAC CGCCTGCAAG CGGCTCGGTG ATACCGCAGC GATGATCATC
AAGGGGGGTG GCGGGGAGTT CGAGCGCCAC CCGGGCAAAG CTGTCGTTTG CCACGGCCAC
GGACCGACCG GTGCCTGGAC CGACGCGCCG GCGCTTCTCA GAGATCCGCG GCGCCTGACG
GAAGTGACCG ACAATCCGGC GCATCTGACC GCGCTCTGGA ACGGGACGTG GCATCATCCA
TTCGCCTTGG CGACCGTGCT CGGGACTGCG GCCCTGGCTC TTTGGAGCCT GGGTGCCAAC
CAGACCCTCG CCGATGCCGA AGCCCACGCC GCCCGGCTCT GGGCAACCCG CTCATCCCGC
CGCGCCGCGT AA
 
Protein sequence
MSLASYIAIV ARGPGRARPL TETEARAAMG HVLDGTGAAE AVGALLMTLR LRGETEDEIT 
GFAGALRDHM QRWRALDVDL DWPSYSAGRT RGLPWYLLSA RLVAQAGYRV MLHGRNGGDA
ALRSYLAAQG VAIAQTPAAA TAALDASGLV YIPLEALSRR TTDLLALRAH LGLRSCVNTC
LRVANPAGAR VTVQGVFHPP YRALQETACK RLGDTAAMII KGGGGEFERH PGKAVVCHGH
GPTGAWTDAP ALLRDPRRLT EVTDNPAHLT ALWNGTWHHP FALATVLGTA ALALWSLGAN
QTLADAEAHA ARLWATRSSR RAA