| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1651 |
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| Symbol | |
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| ID | 5713216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1716129 |
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| End bp | 1717133 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641267567 |
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| Product | inner membrane ABC transporter permease protein |
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| Protein accession | YP_001532994 |
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| Protein GI | 159044200 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0167176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00000136024 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATCCGG CATTTCAGGG ATTGATCACC ATCATCATCG GCGTCGGCGG CTGTGTCGGC
TATTTCTACT TTGCCAATCA GTTTCTCGAT AAGGTGCTCT ACCCGGCCAA GGGTCCGAAG
GCGGGGCGCA ACATAAACCG CGCCAACCAG ATCCGGCCAT GGATCTTCCT GTTTCCGGCG
CTGTTCGTCC TCCTGCTCTA TCTCGGTTAC CCGGTGGTTG AAACGCTGCG CCTGTCGCTG
CTCGAACGGG TGCCCGGCGG CGGGTATCAG TGGGTCGGGC TCGACAACTA CGCCCAGATG
GCCTCGGAGC CGAAATTCTG GGAAGCCATG CGCAACAACA TGTTCTGGCT CATTGTGGTG
CCTGCGCTCT CGACCGCCTT CGGTTTGCTG GCGGCCCAAC TGACCGACCG GATCAAATGG
GGCAACGTCG CCAAGTCGAT CATCTTCATG CCCATGGCGA TCAGCTTCGT GGGGGCTTCG
GTGATCTGGA AGCTGGTCTA TGACGGCCGC CCCATCGAGC AGGAGCAGAT CGGTATCCTG
AACGCGATCA TCGTTGGGCT GGGTGGTGAC CCGGTAACGT TCCTGACGAT CCCGTTCTGG
AACAACTTTT TCCTGATGAT CGTGCTGGTC TGGGTGCAGA CCGGGTTTGC CATGGTGATC
CTGTCGGCCG CCTTGCGGGG CATTCCCGAA GAGACCATCG AGGCCGCGAT CATCGACGGG
GCCTCGCCAT TGCAGATCTT CTTCAAGATC AAGGTACCGC AGATCATGCC CACAGTGGTG
GTGGTCTGGA CCACGATCAC GCTCGTGGTG CTCAAGGTGT TCGACATCGT CTTCGCCATG
ACCAACGGGC AATGGGAGAC GCAGGTGCTG GCGAACTACA TGTTCGACAA GCTCTTCCGC
GCCAATGACT GGGGCGTGGG GTCGGCCAGT GCCATGGTGA TCATGCTTCT GGTGACACCA
ATCCTTATCT GGAACATCCA CAGCGCGCGC AAGGAAATGC GCTGA
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| Protein sequence | MHPAFQGLIT IIIGVGGCVG YFYFANQFLD KVLYPAKGPK AGRNINRANQ IRPWIFLFPA
LFVLLLYLGY PVVETLRLSL LERVPGGGYQ WVGLDNYAQM ASEPKFWEAM RNNMFWLIVV
PALSTAFGLL AAQLTDRIKW GNVAKSIIFM PMAISFVGAS VIWKLVYDGR PIEQEQIGIL
NAIIVGLGGD PVTFLTIPFW NNFFLMIVLV WVQTGFAMVI LSAALRGIPE ETIEAAIIDG
ASPLQIFFKI KVPQIMPTVV VVWTTITLVV LKVFDIVFAM TNGQWETQVL ANYMFDKLFR
ANDWGVGSAS AMVIMLLVTP ILIWNIHSAR KEMR
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