| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1650 |
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| Symbol | |
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| ID | 5713215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1714954 |
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| End bp | 1716111 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641267566 |
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| Product | inner membrane ABC transporter permease protein |
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| Protein accession | YP_001532993 |
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| Protein GI | 159044199 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.349838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000401935 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAATA TCGCTGGAAG CAAATCTTCG CTGACCTGGG CTGTGCAACT CTCCGTGGTG
GGGCTGGTGG TCTTGTGGCT GCTGCCGACG TTCGGGCTGT TCGTGTCGTC CTTCCGGACG
GTGGAGCAGA TCTCGTCGAG CGGCTGGTGG AAGGCGATGT TCCCGTCGGA ACAGAACCTC
ACCTTGCGCG CGGCGGACCC GGATGATTTC CGGATGCCAC AGGGCGACCT GTTCGTAGTC
AAGGGCAATC TCTTCGAGGA CGAGGGCATT TCGGAGGCGG AAATCAGCGT ATGGGGCACG
TCCAGCCGCG ATGTGGCCGC CTATACCGCG GGCGAGACGG CCGACCTGGG AGACGGTGAA
ACCATTACCG TGCAGAGTAA TGGCGCCTAT GTCTGGTCGG GCACTGACGA TCAGATCAGT
GGGCGCGGCC AAAGGGTCTT TGTGACCGCC ACCACACCGC CGGAGTTCAC CTTCGCGAAC
TATGAAAACA TGCTCCTCGA TCCGAACAAT TCGGAAGGAA TGGCGCGGGC GTTCTTCAAC
ACGCTAACCG TGACGATCCC GGCGACGATC ATCCCGATCC TTGTGGCGGC CTTCGCGGCC
TATGCGCTGG CCTGGATGGA ATTTCCGGGT CGTGCGCTGC TGATTGCGCT TATTGTGGGC
TTGCTGGTCG TGCCCTTGCA ACTGGCACTC ATCCCGCTTT TGACCCTGCA CAATGCGATC
GGGATCGGGA AGGGGTATCT TGGCACCTGG TTGGCCCATA CGGGGTTTGG CATGCCGCTG
GCGATCTATC TGTTACGCAA CTACATGGTC GGTTTGCCAC GGGACATCAT CGAAAATGCC
AAGGTCGATG GGGCAACGGA TTTCCAGATC TTCACTAAGA TCGTGTTACC GCTGTCCTTC
CCGGCGCTGG CCTCCTTCGC GATCTTCCAG TTCCTGTGGA CCTGGAACGA CCTGCTGGTG
GCCAAGGTCT TCCTGATCGA TGCCACCGGC CAGACGACGG TCATGACCAA CCAGATCGTC
GAGCTTCTGG GCACCCGCGG CGGCAACTGG GAGATCCTCG CCACGGCGGC CTTTGTATCC
ATCGCGGTGC CGCTCCTGGT GTTTTTCTCC ATGCAACGTT TTCTCGTGCG CGGCCTCTTG
GCCGGCTCGG TCAAGTAA
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| Protein sequence | MDNIAGSKSS LTWAVQLSVV GLVVLWLLPT FGLFVSSFRT VEQISSSGWW KAMFPSEQNL
TLRAADPDDF RMPQGDLFVV KGNLFEDEGI SEAEISVWGT SSRDVAAYTA GETADLGDGE
TITVQSNGAY VWSGTDDQIS GRGQRVFVTA TTPPEFTFAN YENMLLDPNN SEGMARAFFN
TLTVTIPATI IPILVAAFAA YALAWMEFPG RALLIALIVG LLVVPLQLAL IPLLTLHNAI
GIGKGYLGTW LAHTGFGMPL AIYLLRNYMV GLPRDIIENA KVDGATDFQI FTKIVLPLSF
PALASFAIFQ FLWTWNDLLV AKVFLIDATG QTTVMTNQIV ELLGTRGGNW EILATAAFVS
IAVPLLVFFS MQRFLVRGLL AGSVK
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