| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1628 |
|---|
| Symbol | |
|---|
| ID | 5712773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 1693326 |
|---|
| End bp | 1693640 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641267544 |
|---|
| Product | UPF0145 protein |
|---|
| Protein accession | YP_001532971 |
|---|
| Protein GI | 159044177 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0393] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.546028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.00080679 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCATCA CCACCACGAA CTCTGTGGAA GGGCACAAGA TCACTGCCTA TCGCGGCGTC
GTGGTGGGCG AAGCGATCAT GGGAGCCAAT GTCGTGCGGG ATTTCTTCGC CGGCATCACC
GATATCGTCG GTGGGCGCTC CGGGGCCTAT GAGGCCAAGT TGCAGGACGC CCGCGACACC
GCTTTGCGCG AGCTTGAAGA CAGGGCGCGC GAGGCAGGCG GAAACGCGGT GGTCGGTGTC
GATCTGGATT ATGAAGTTGT CGGCGACAGC ATGCTCATGG TTTCGGCCTC GGGTACGGCT
GTCGTCCTGG AATAA
|
|---|
| Protein sequence | MIITTTNSVE GHKITAYRGV VVGEAIMGAN VVRDFFAGIT DIVGGRSGAY EAKLQDARDT
ALRELEDRAR EAGGNAVVGV DLDYEVVGDS MLMVSASGTA VVLE
|
|---|
| |