Gene Dshi_1606 details

Gene Information

• Locus tag: Dshi_1606
• Symbol: ssb
• ID: 5712750
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dinoroseobacter shibae DFL 12
• Kingdom: Bacteria
• Replicon accession: NC_009952
• Strand: +
• Start bp: 1669410
• End bp: 1669916
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 641267521
• Product: single stranded DNA-binding protein
• Protein accession: YP_001532949
• Protein GI: 159044155
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.597102
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 0.594419
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAGGTT CGGTCAACAA GGTCATTTTG GTCGGAAATC TCGGGCGCGA CCCGGAAGTG 
CGCACGTTCC AGAATGGCGG CAAGGTGTGC AATCTGCGCA TTGCCACCTC CGAGAACTGG 
AAGGATCGCA ACACCGGCGA GCGGCGCGAG AAGACAGAGT GGCACTCCGT CGCGATCTTC 
TCGGAACCGC TCGCGCGGGT GGCAGAACAG TATCTGCGCA AAGGCTCCAA GGTTTATATC 
GAGGGCCAGT TGGAAACCCG GAAATGGCAG GACCAGTCTG GCCAGGACCG TTACTCCACC 
GAGGTCGTTC TGCGCCCCTA CAAGTCCGAA CTGACCATGC TGGACGGTCG CGACGGCGGC 
GGCGGTGGCA TGGGCGGTGG TGGCGGCTAC GTCTCGGACC AGTCCGGCGG CGGCGGATAC 
AGCGATGACC GGTTCGGCGG CGACAGCGGC AACGCGCCTG CGGGAGGCGG GCGCCATAAC 
GATCTCGACG ACGAGATCCC GTTCTGA 

 

Protein sequence

MAGSVNKVIL VGNLGRDPEV RTFQNGGKVC NLRIATSENW KDRNTGERRE KTEWHSVAIF 
SEPLARVAEQ YLRKGSKVYI EGQLETRKWQ DQSGQDRYST EVVLRPYKSE LTMLDGRDGG 
GGGMGGGGGY VSDQSGGGGY SDDRFGGDSG NAPAGGGRHN DLDDEIPF