| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1575 |
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| Symbol | ntrB |
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| ID | 5712719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1642326 |
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| End bp | 1643399 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267490 |
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| Product | nitrogen regulation protein |
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| Protein accession | YP_001532918 |
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| Protein GI | 159044124 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0711174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0291432 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGC TCACCCAGGC CCTCTGGGTT TCCCTTCCGA TCCCGGCGCT GATCCTGTCG
GGCGAGAACA CCATTCTCGA ACTCAACCCG GCGGCCGAGA ATTTCATGAA CGGCTCCCAG
CGCAGCCTTC TGGACGCGCC GGTCTGGGAC AAGTTGATGG TCGACGCGCC CCTCGAAGAG
GCGTTCGACC GGGTCCGCAA GAACCTCTCG CCGCTCTTCA TCAACGATGT GGACGTGGGC
ACGGGCGAAC GCCCGCCGGT GCTTTGCAAC ATCCAGGTCT CGCCTTTGGT GGACAATCCC
GAACTTGTGC TGCTGCTGCT GGAGCCGCGG GAAATCGCCG GGCGTCTGGG CCGGTCGATG
CAGTCCCAGT CGGCCGCAAA ATCCGCGATA GGCATGGCCG AGATGCTTGC CCATGAAATC
AAGAACCCCC TGGCCGGCAT CACCGGGGCC GCGCAGCTTC TGGGCATGAA CCTGTCGAAC
GAGGACCGGG AGCTGACCGA CCTGATCGTC GCCGAAAGCC ACCGGATCGT GAAACTGCTG
GAACAGGTGG AGCAGTTCGG CAACCTGCGT CCCCCCGACC TCAGGCCCGT CAATATACAT
GATGTGCTGG AACGCGCGCG CAGATCCGCC GTGGTGGGCT TCGGGGCTCA TGTCACGATC
CGCGAGGATT ACGACCCGTC CCTGCCCAAC ACCTATGCCG ATGGTGACCA ACTGCTGCAG
GTATTTCTCA ACCTGCTCAA GAACGCCGCC GAGGCCTGCA AACCCGGCGG GACGATCAGG
ATCCGGACCT TCTACGAGCT GTCGTTACGT TTGCGGCGCA AGGACGGCTC TGGCGGCACC
GTGCCGTTGC AGATCGAGAT CATGGATGAC GGCCCCGGCC TGCCCCCCGA GATCGAGAGT
GACGTGTTCG AACCCTTCGT GTCGGGGCGC GAGAATGGCA CCGGGCTGGG ACTCGCGCTC
GTCTCCAAGA TCATCTCCGA TCACGATGGC TGGATCGCCG TGGACAGCGT CCCTGGCCGC
ACCGTGTTCC GTATTTCCCT GCCTGTCGCC CCCCGCACCG AGGAGACTAC CTGA
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| Protein sequence | MTQLTQALWV SLPIPALILS GENTILELNP AAENFMNGSQ RSLLDAPVWD KLMVDAPLEE
AFDRVRKNLS PLFINDVDVG TGERPPVLCN IQVSPLVDNP ELVLLLLEPR EIAGRLGRSM
QSQSAAKSAI GMAEMLAHEI KNPLAGITGA AQLLGMNLSN EDRELTDLIV AESHRIVKLL
EQVEQFGNLR PPDLRPVNIH DVLERARRSA VVGFGAHVTI REDYDPSLPN TYADGDQLLQ
VFLNLLKNAA EACKPGGTIR IRTFYELSLR LRRKDGSGGT VPLQIEIMDD GPGLPPEIES
DVFEPFVSGR ENGTGLGLAL VSKIISDHDG WIAVDSVPGR TVFRISLPVA PRTEETT
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