| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1572 |
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| Symbol | ntrX |
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| ID | 5712716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1637185 |
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| End bp | 1638600 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641267487 |
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| Product | nitrogen assimilation regulator receiver protein |
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| Protein accession | YP_001532915 |
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| Protein GI | 159044121 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.181589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0771654 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA TTCTGATCAT CGACGACGAG AAGGACATTC GCGAGCTGGT CTCCGACATC
CTTCAGGACG AAGGCTACGC CACCCGCACG GTCGGCACCG CCGAAGATTG CATGGACCAG
ATCGAGGCCC AGCCCCCCGG CCTGATGATC CTCGACATCT GGCTCAAGGA CAGCTCGATG
GACGGCATCG ACATCCTCGT TCGGGTCAAG CGCGAGCGCC CCGAGATCCC CATCGTGATC
ATATCCGGCC ACGGCAATAT CGAGATCGCC GTCGCCGCCA TCAAGCAGGG CGCCTATGAC
TTCATCGAAA AGCCTTTCAA CATCGACCAG CTGCTGCTGG TGGTCAAACG CGCCATGGAA
ACCTCCAAGC TGCGCCGCGA GAATGCCGAG TTGAAACGCC AGGGCCCGGT GGCGACCGAC
CTTCTGGGCA ACTCCGCCGC GATGAAAACC CTGCGCAGCC AGCTCGACAA GGTCACCCGT
TCCAACGGCC GGGTGATGCT CACCGGCCCC TCGGGCAGCG GCAAGGAGGT CGCCGCCCGC
TACATTCATG CCAATTCGGC CCGCGCCTCC GGACCCTTCG TGTCCGTCAA CTCCGCCGCG
ATCGAGGCCG ACCGCATGGA AGAGGTGCTC TTCGGGCGCG AAGGGCCGGA CAAATCCGTG
GAAAAGGGTT TGCTGGAGCT GGCCGATGGC GGTGTGATCT TCTTCGACGA GGTGGCCGAC
ATGCCCGCCG GCACCCAGTC CAAGATCCTG CGCGTCCTCG TGGACCAGCA GTTCCAGCGC
GTCGGCGGCA CCCAAAAGGT GAAGGTCGAT CTGCGCGTGA TCTCATCCTC GACCACGGAT
CTCGAGGCCG AGGTCGCCAG CGGTCGGCTC CGGCAAGAGC TGTTCCACCG GCTCAACGTG
GTCCCGATCA CCGTGCCCTC GCTCGATGAG CGGCGCGAGG ACATCCCCGT CCTGGCGCGC
CACTTCATCG CCCATTTCAA CGAAACCCAG GGCCTCGCCG CGCGCGAACT GGGGGCCGAG
GCCGAGGCGA TGTTGCAGAC CATGCGCTGG CCCGGCAATG TCCGCCAGCT CAAGAACGTG
ATGGAACGCG TGCTGATCCT CGGCACCGGC GAGGGGGAGA TCAGCCCCGA AGAACTGCCC
AGCGCAGGCC CCGAAGCCGA GGCCGATGGC GCCACCGGGC TGGTCTCGGG CACGCTCGCG
ACGCTGCCCC TGCGCGAGGC GCGCGAGCTT TTCGAACGCG AATACCTGAT GACGCAGATC
AACCGCTTCG GCGGCAACAT CTCCCGCACG GCGGCCTTCG TCGGCATGGA ACGCTCGGCT
CTCCACCGAA AACTGAAATC GCTCAACGTG GTGACCAGCA CCAAGTCCGG GGCCCGCGTC
GCCCATGTGG AACAGGTGGA GGCTCAGGAG GACTGA
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| Protein sequence | MTDILIIDDE KDIRELVSDI LQDEGYATRT VGTAEDCMDQ IEAQPPGLMI LDIWLKDSSM
DGIDILVRVK RERPEIPIVI ISGHGNIEIA VAAIKQGAYD FIEKPFNIDQ LLLVVKRAME
TSKLRRENAE LKRQGPVATD LLGNSAAMKT LRSQLDKVTR SNGRVMLTGP SGSGKEVAAR
YIHANSARAS GPFVSVNSAA IEADRMEEVL FGREGPDKSV EKGLLELADG GVIFFDEVAD
MPAGTQSKIL RVLVDQQFQR VGGTQKVKVD LRVISSSTTD LEAEVASGRL RQELFHRLNV
VPITVPSLDE RREDIPVLAR HFIAHFNETQ GLAARELGAE AEAMLQTMRW PGNVRQLKNV
MERVLILGTG EGEISPEELP SAGPEAEADG ATGLVSGTLA TLPLREAREL FEREYLMTQI
NRFGGNISRT AAFVGMERSA LHRKLKSLNV VTSTKSGARV AHVEQVEAQE D
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