Gene Dshi_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1465 
Symbol 
ID5712643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1520424 
End bp1520951 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content72% 
IMG OID641267379 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001532808 
Protein GI159044014 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0333555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCC CGCTGCCCGA GCTGCGCACC GCGCGGTTGC ACCTGCGCCC GCTCGCGCCC 
GGCGACGCCG CCGCGCTCGC GCGCATCGCC GGACACCCCA AGGTCGCGCC CAACATCTTC
GTGGCCACCA TCCCCTGGCC GGAGGTCGAG GCCGCGGCCC TGATCGCGCG CGACACCTGG
CGCGGCACCC TGGGCTTCCG GCTGGCGATC TGCCTGCCGG AGGGGCGGAT GATCGGCTCC
ATCGGGGTCA GCCGACAGCC GCATATCTTC TACTTTCTCG ACCCCGACAG CTGGGGCCGG
GGCTACGCCC GCGAGGCGGT CCGGGCCTTT GCCGACGCGG TGCAGACCCG GTTCGACCTG
CCGGTGCTCG GGGCCGAGGT CTTCACCGAC AACCCCGCCT CCGGCAAGGT GCTAAAGGCC
TGCGGCTTTG CGCGCACGGG GCAGAGCATG GCAACCTCCC GCGCGCGGCT TGAGCCTGCG
CCGGTGTTCC TGTACGAGCG ACGCCAACCC GAAAAGGCGC TTTCATGA
 
Protein sequence
MTGPLPELRT ARLHLRPLAP GDAAALARIA GHPKVAPNIF VATIPWPEVE AAALIARDTW 
RGTLGFRLAI CLPEGRMIGS IGVSRQPHIF YFLDPDSWGR GYAREAVRAF ADAVQTRFDL
PVLGAEVFTD NPASGKVLKA CGFARTGQSM ATSRARLEPA PVFLYERRQP EKALS