Gene Dshi_1464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1464 
Symbol 
ID5712642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1519918 
End bp1520427 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content69% 
IMG OID641267378 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001532807 
Protein GI159044013 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0310541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACGC CGGGCCACGT TCTGACGACG GCCCGGCTCT GCTTGCGCCC GGTCGTCGAT 
GCCGACGCCG CCGCGATCGT CGCGGCGATC CACGATTTCG AGGTGCTGCG CTGGCTTTCC
CGTGCGCCCT ATCCCTACGG GCTGTCCGAT GCCGTGGACT TCATCGCCAA GAACCGCGGC
AACGCGGGCG AGGTCTGGAT GATCCATGAC GCGGGCGGTC TTGTCGGCTG CATCGGGCGG
CGTCGGGAAT TCGGCTACTG GCTGCGGCGC GCCGCCTGGG GGCAGGGCTA TGCCACCGAG
GCATCGCGCG CCGTGCTTGC CCATCATTTT GCCGCCCCCG ATGCGCCGGG GTTGCTCTCG
GGCTACCACG CGGGCAACAC GCGGTCGGCC CGGGTGCTGA GCAAGCTGGG CTTCACGCCC
TGCGCGGACC GTCGCATCAC GCCGCTCTCC ACCGGGCAGG AGGTCGTCAT CAAGGGGATG
TGGCTGGACC AGGAGGATTA CGTGCCATGA
 
Protein sequence
MQTPGHVLTT ARLCLRPVVD ADAAAIVAAI HDFEVLRWLS RAPYPYGLSD AVDFIAKNRG 
NAGEVWMIHD AGGLVGCIGR RREFGYWLRR AAWGQGYATE ASRAVLAHHF AAPDAPGLLS
GYHAGNTRSA RVLSKLGFTP CADRRITPLS TGQEVVIKGM WLDQEDYVP