| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1377 |
|---|
| Symbol | |
|---|
| ID | 5712553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 1430706 |
|---|
| End bp | 1431608 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641267289 |
|---|
| Product | 2OG-Fe(II) oxygenase |
|---|
| Protein accession | YP_001532720 |
|---|
| Protein GI | 159043926 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3491] Isopenicillin N synthase and related dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.537796 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGTTC CGGTTCTCGA CGGCGCGAAG CTGACGCGCG ACCCGCAGGG GCTGGCTGCG
GAGCTTGGGG CCGCGGCGCG CGGGCCCGGG TTCTTCCTGC TGACCGAGCA CGGTATCCCC
GAGGCCCTGA TCACGGCGGT CTTTGCCGAG GGGGACCGGT TCTTCGACCT GCCGAGCGCC
GAGAAGGCGC GCGTGGCGAT CGATGCCACC AACCGGGGCT GGGCCGCGGA GGGCACCGAG
CGGCTGGATC CCGAAGGCGG GGCTGTGGAC CGCAAGGAAG CGTTCAACAT GGGGCTCGAC
CTGGCGGCGG ACGACCCGCG CGTCCTGGCG GGGGAGCCGT TTCGGGCGGC CAATCGCTGG
CCGAAGCTGC CGGGTTTTGC GCCGACGCTG CGCCGCTATT TCGAGGCAGT TCAGGCCTTG
GGCGTGCAGG TGATGAGGCT GGTGGCGCGC GACCTGGGCC TTGCGCCGGA CCATTTCGAC
CGCGATTTCG ATGCGCCCAT GGCGACGCTG CGGCTGTTGC GGTATCCTGC GGGCGATCCG
GCCGCCGGTA TCGGCGCGGG CGCGCATACG GATTACGGGG CGCTGACCTT CTTGCGCACC
GACGGTGTTC CCGGGTTGCA GCTGCGGGTG CGCGGCTCGG ACGCCTGGAC GGACGTGCCC
GATGTGCCCG GGGCCTATAT CGTCAATATC GGTGACTGCC TGATGCGCTG GTCGAACGAC
ACCTATGTCT CGACCCCGCA CCGGGTGTTG CCGCCGCCGC GCCCGCGCCG GTCGCTGGCC
TTCTTCCTCG ACCCCAATCC CGATGCGGTG ATCTCCGCCC TGCCCGGCAC CGGTGCGCCG
AAATACCCCG AGACCACGGG TGCGGATTAC CTGCGCAGCC GTCTGGAGGC GACCTATGGC
TGA
|
|---|
| Protein sequence | MEVPVLDGAK LTRDPQGLAA ELGAAARGPG FFLLTEHGIP EALITAVFAE GDRFFDLPSA
EKARVAIDAT NRGWAAEGTE RLDPEGGAVD RKEAFNMGLD LAADDPRVLA GEPFRAANRW
PKLPGFAPTL RRYFEAVQAL GVQVMRLVAR DLGLAPDHFD RDFDAPMATL RLLRYPAGDP
AAGIGAGAHT DYGALTFLRT DGVPGLQLRV RGSDAWTDVP DVPGAYIVNI GDCLMRWSND
TYVSTPHRVL PPPRPRRSLA FFLDPNPDAV ISALPGTGAP KYPETTGADY LRSRLEATYG
|
|---|
| |