Gene Dshi_1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1273 
Symbol 
ID5711831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1322983 
End bp1323981 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content65% 
IMG OID641267185 
Producttranscriptional regulator 
Protein accessionYP_001532616 
Protein GI159043822 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.690479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.464458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTCA CTTTGAAAGA AGTCGCGGAA CGCGCCGGGG TTTCGCGGTC GGCGGTCTCG 
CGGACCTTCA CCGAGGGCGC GTCGGTCTCG CCCAAGACCC GCCGCAAGGT TGAAAAGGCC
GCGGTGGAGC TTGGCTATCG GCCCAATGCG CTCGCCTCGT CGCTGACGAC CGGGCGGACC
AAGCTGATCG GGCTGATCTC GAACAACTTC CGCAATCCGC TCTTTCTGGA GGTGTTCGAC
CTCTTCACCC GGCTGTTGCA GGAGCGCGGG TTGCGTCCGC TGCTGGTGAA CCTGTCGGAC
GAGAACGACC CGGAAAACTC GATCAGCATG CTGCGGCAAT ACTCGGTCGA CGGAGTGATC
GTCGCCTCGT CGACGTTGCC CCCCAGTTTC TCCAAGGCGT TCCGGGATGC CGGGATTCCG
GTTGTCCATT CCTTCGGACG CTTTGCCAGC GCGCCCCATG TCCACGTGGT GGGCATCGAC
AATATCGAAT GCGGCCGGAT GGCGGCGCGC ACCCTGCTGG CGCGCGGCTA CCACAAGATC
GGGTTCATGG GCGGCCCCCG CGAGGCCACC TCGACCATTG ATCGCCGCGA GGGATTCCAC
CAGGTCGTCG CCCGCCGCAA CGGCATCGAG GTCTCGGAAA GCTTCGCTGC CGCCTATTCC
TTCGACGCAG GCAAGACCGA GATGTCCCGG CTGTTGCAGC ACGGCCCGGC GGAGGCGTAT
TTCTGCGGCG ATGATGTTCT GTCCATAGGC GCGCTGGCCG CGATCGAGGC GGCGGGCCTG
CGCGTGCCCC AAGATGTCGG GATCATCGGT CTCAACGACA TGGAAATGGC CGGCTGGAGC
AATCTGGACC TCACCACCAT TCGTCAGCCC GTGCAGCAGA TCATCAGCAG TTCCATCGAG
TTGGTCGTGG CCATGCTCGA AGAGCCGGAC CGATATCCCG AGGCCCGGCT CTTTGCCTGC
GAGGTGATCG AACGGGGGAC GCTGCGCCCC GTGCCCTGA
 
Protein sequence
MPVTLKEVAE RAGVSRSAVS RTFTEGASVS PKTRRKVEKA AVELGYRPNA LASSLTTGRT 
KLIGLISNNF RNPLFLEVFD LFTRLLQERG LRPLLVNLSD ENDPENSISM LRQYSVDGVI
VASSTLPPSF SKAFRDAGIP VVHSFGRFAS APHVHVVGID NIECGRMAAR TLLARGYHKI
GFMGGPREAT STIDRREGFH QVVARRNGIE VSESFAAAYS FDAGKTEMSR LLQHGPAEAY
FCGDDVLSIG ALAAIEAAGL RVPQDVGIIG LNDMEMAGWS NLDLTTIRQP VQQIISSSIE
LVVAMLEEPD RYPEARLFAC EVIERGTLRP VP