Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1272 |
Symbol | |
ID | 5711830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1321819 |
End bp | 1322952 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641267184 |
Product | oxidoreductase domain protein |
Protein accession | YP_001532615 |
Protein GI | 159043821 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.796497 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAAC TGACCTGGGG CATGATCGGC GGCGGCGAAG GCAGCCAGAT CGGGCCGGCG CATCGGCTGG GCGCGCTGGC GGACGGTAAT TTCACGCTGA CTGCGGGCGC GCTGGACGCG GACGGCCCCA GGGGCAAGGC CTATGCCGAG CGCCTCGGCG TTGCCCCGGA CCGCGCCTAT GGCGATTGGC GCGAGATGCT CGCGGGCGAA CGGGATCGCC CCGACAAGCT GGACCTCGTT ACCGTCGCCA CGCCCAACGC CACCCATTTC GAGATCACCA AGGCTTTCCT GAACGCCGGG TTCAACGTGC TGTGCGAGAA GCCCATGACC ATGACGGTCG AAGAGGGGGA GGAGATCGTG CGCATCGCCG AGGCCTCGGG TCGGATCTGC GCGGTGAATT ACTGCTACTC GGCCTACCCG ATGGTGCGGG AAATGCGCGC CATGGTGCAC CGGGGCGATT TGGGCGCAAT CCGCACGGTC GTTACCAACT TCTCCCACGG GCATCACGCC GCCGGGGACG ATGCCGACAA CCCGCGCGTG CGCTGGCGCT ACGATCCGGC CATGGCGGGG GTCTCGGGGC AAATGGCCGA TTGCGGGATC CATGCGCTCC ACCTGGCGTC CTTCATCACC GGGGACGAGG TGCGCACCTT GTCGGCGGAT TTCGCATCCA CCGTGCCCTC CCGCGTGCTG GAGGATGACG CGATGGTCAA TTTCCGGATG GAGGGGGGCA CGGTCGGCAG GCTCTGGTCC TCGACCATCG CCATCGGACG GATGCACGGG CTCGATATCC AGGTCTTCGG CGAACTGGGC GGCATCCGGT GGGCCTCCGA GCAGCCCAAC CAAGTTTACT ACACGCGCCT GAACGGGCGC ACCGAGATCA TCGAGAAGGG CGAGGCGGGG CTGACCTCCG AGGCGCAGCG CCTCAGCCGC GTGGCCATCG CCCACCCGGA GGGGTTCCCG CTGGCGGTCG CGAACATCTA TGTCGATCTC GCGGCCCGGA TCCGTGGCGA GGCCTCGGGC GACCTGCCCC TGGCGGTGGA TGGGTTGCGG TCCATGGCGG CGGTGCACGC GGCCGTGCAA AGCGCGGGGC AAAACGGGGC CTGGGTCGAT GCCCGTCCGC CCTCCTTGCG GTAA
|
Protein sequence | MKKLTWGMIG GGEGSQIGPA HRLGALADGN FTLTAGALDA DGPRGKAYAE RLGVAPDRAY GDWREMLAGE RDRPDKLDLV TVATPNATHF EITKAFLNAG FNVLCEKPMT MTVEEGEEIV RIAEASGRIC AVNYCYSAYP MVREMRAMVH RGDLGAIRTV VTNFSHGHHA AGDDADNPRV RWRYDPAMAG VSGQMADCGI HALHLASFIT GDEVRTLSAD FASTVPSRVL EDDAMVNFRM EGGTVGRLWS STIAIGRMHG LDIQVFGELG GIRWASEQPN QVYYTRLNGR TEIIEKGEAG LTSEAQRLSR VAIAHPEGFP LAVANIYVDL AARIRGEASG DLPLAVDGLR SMAAVHAAVQ SAGQNGAWVD ARPPSLR
|
| |