| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1169 |
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| Symbol | amiC |
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| ID | 5711937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1199349 |
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| End bp | 1200617 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641267080 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_001532512 |
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| Protein GI | 159043718 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0265723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.653656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACTGG ACAGGCAATC GCGCTCTGGG CCGCGTTCGG CGCGGGTGTG GGCGGTATTT
CTGGGGGCGA TCCTTTCGGT GCTGGCCTTG CCCCTCTTGG CGCAGGAGCT GCGCGCCGTC
GCGCGCATCG ACCCGATCAC GTCCTCGGTG TCGGGCACCA CGGACGATTT ACGCCTCACC
CTCGGCCTGA GCCAGCCGGT GCCGTACCGG ATCGAGGCCC GCCGCGACCC GGACCGCATC
GTGATCGAGT TTCGCGAGGT CGATTTCAGC GGCGCCGAGC CCGGCAAATA CCTCTCCTCC
GCTGCCCTGC GCGGGGTGAT CGCGGGGCCG GCGCGCCCCG GTTGGTCCCG GCTGGAGCTG
CTCTTGAGCG CGCCCATGGG GCTTGAGACT GCCGAGATGC AGACCGATGC GACGCTCGGC
TCCGCGCTGC TCGAAGTGAC GTTAGGGGCC CGCAGCCGTG AAGAGTTCGA CGCGGCCGCG
ATCACCGGCG ATCTCGGCGT GGCCGCCCCC GAGCCGCCCG ATGTGCCGGA ACTGGCCACG
GGCCCCGAAC GCCAGCGCGG CGACCGCCCG CTGGTCATCA TGCTCGACCC CGGGCATGGC
GGCTTCGACC CGGGCGCCGA GCGCGACGGC CATTCCGAGG CCGACCTGAT GCTGACCTTC
GCCCGCGAAT TGCAGGAACT GATCATCCGC GAGAGCGGCC ATACGGTGCT GCTGACCCGG
AACGCGGACG AATTCGTCCC GCTGCCCGAA CGGGTGCGCA TGGCCCGCGA GGCAGCCGCC
GACCTGTTCA TCTCGCTCCA TGCGGATTCG CTCTTGTCCG GGCGGGCCTC GGGCGCGACG
GTCTACACCT TGTCGGACGT GGCCTCCAGC GAAGCTTCCG CCAAGCTGGC CGAGCGCATG
GACCGCGCGA GCCTTCTGGC CGGGCTGGAC CTGACGGCCC AGGACGACAC GCTGGCCACC
GCGTTGATGG ACGTGGCAAG GCTGGAGGTC GCGCCGCGGG CGGCCCGGCT GGCCGACACC
CTGGTGACCG GGCTGGGCGA AACCGTGGGC GATCTGCACA AGCGGCCCCG GCAATTCGCG
GATTTCTCGG TCCTGCGCGC GCCGGACATC CCATCGGTGC TGGTGGAGCT GGGCTTCCTG
AGCAGCGACA ACGACCTTGC GCGGCTCCTC TCGCCGGAGT GGCGGGCGAA CGCGGCGGAG
GGGATTCGCC GCGGCATCGA CGCCTGGGCG GTGGCCGACG CGGCCGAGGC CGATCTGGTC
CGTCAGTGA
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| Protein sequence | MTLDRQSRSG PRSARVWAVF LGAILSVLAL PLLAQELRAV ARIDPITSSV SGTTDDLRLT
LGLSQPVPYR IEARRDPDRI VIEFREVDFS GAEPGKYLSS AALRGVIAGP ARPGWSRLEL
LLSAPMGLET AEMQTDATLG SALLEVTLGA RSREEFDAAA ITGDLGVAAP EPPDVPELAT
GPERQRGDRP LVIMLDPGHG GFDPGAERDG HSEADLMLTF ARELQELIIR ESGHTVLLTR
NADEFVPLPE RVRMAREAAA DLFISLHADS LLSGRASGAT VYTLSDVASS EASAKLAERM
DRASLLAGLD LTAQDDTLAT ALMDVARLEV APRAARLADT LVTGLGETVG DLHKRPRQFA
DFSVLRAPDI PSVLVELGFL SSDNDLARLL SPEWRANAAE GIRRGIDAWA VADAAEADLV
RQ
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