| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1162 |
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| Symbol | |
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| ID | 5711930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1188220 |
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| End bp | 1191789 |
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| Gene Length | 3570 bp |
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| Protein Length | 1189 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267073 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001532505 |
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| Protein GI | 159043711 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGGGAC TGGTCGATTG GGCCGCGTCC CGGGCGCGGA TGGTCATTGC CTTCGTGATG
CTCTCCCTGC TCGCGGGGAC CTTCGCCTAT ATCAGCCTGC CCAAGGAGGG CGAGCCGGAC
ATCGAGATCC CGGCGCTCTT CGTGTCGGTC CCCTTCCCCG GCATCTCGGC GGAGGATTCC
GAAAAACTCG TCATCCAGGT GATGGAGACC GAGCTCAGCG ACCTGGACGG TCTGGATCGC
ATGACCTCCA CCGCGGCGGA CAATTATGCC GGTGTGGTGC TGGAGTTCGA GTTCGGCTGG
GACAAGACCA AGATCATTGC CGATGTGCGC GACCGGATGA ACACGGCCGA GGCAAAGTTC
CCGTCGGGAT ACGAGAAATA CTCGATCAAC GAGATCAATT TCAGCCAGTT CCCGATCATC
GTGGTGAACC TGTCGGGATC GCTGCCCGAA CGCACCCTGC TGCGGGTGGC CAAGGATTTG
CAGGACACGC TGGAGGGGTT GGAGCCGGTG CTGGAAGCCG GGCTGGCCGG GCACCGCGAA
GAGATGCTGG AGGTCGTGAT CGACCCCCTG CGACTGGAGA GCTACAATGT CACCGCCGGT
GAATTGCTCT CGGTGGTGCA GAACAACAAC CAGTTGATCG CCGCGGGCGA GGTGGAAACC
GACCAGGGCG CCTTCGCGGT CAAGATCCCG TCGGCCTTCG ACGAACAGAC AGACGTCCTC
AACCTGCCGG TGAAGGTCAA TGGCGACCGG GTGGTGACCC TGGGCGACCT GGCCGATATC
CGGCTGACCT TCGAGGACCG GACCGGGACC GCGCGCTACA ATGGCGACGA CACGGTCGCG
TTGCAGGTGG TCAAGCGCAA GGGCTTCAAC CTGATCGACA CCGCCACCCT GGTACGGGAG
ACCGTGGCCG ACGCCCAGGC CAGCTGGCCA CCGGAGTTGC GCGACGCGGT GGAGATCAAC
ATTTCCATGG ACCAGTCGCG CATCGTCGCT TCGATGGTGC GGCAGCTCGA AGGCTCGGTT
CTGACGGCGA TCGCGCTGGT GATGATCGTG GTGCTGGCCG CGCTCGGCAC ACGCTCGGCC
CTGCTGGTGG GCTTCGCGAT CCCGACCTCG TTCCTTCTGT GCTTTGCCTT GCTGGCGGTG
ATGGACATCA CCGTGTCGAA CATCGTGATG TTCGGGCTGA TCCTGGCGGT GGGGATGCTG
GTGGACGGGG CCATCGTGGT GGTGGAATAC GCCGACCGGC GGATCTCCGA AGGCTCAGGG
CCGATGGCCG CCTATACCGA GGCCGCCAAG CGGATGTTCT GGCCCATCGT CAGCTCCACC
GCGACGACGC TCTGTGCCTT CCTGCCGATG CTGTTCTGGC CCGGCGTGGC GGGGCAGTTC
ATGGGGATGC TGCCGGTCAC CCTGATCTTC GTGCTGACCG CGAGCCTCGT GGTCGCGCTG
ATCTACCTGC CGGTGGTCGG CGGGGTGGCG GGTCGCCTGA GCCGGGTGCT GGAGCGGCTG
GCCGCGGGGC TGATGCCGCT GCCGTGGGTA TCGCGGGTGG GTCTGACGGT GCTCTCCGGC
GTGGCAATGT ATACGGCGGT GCTGCAACTG CTGAACCCGT CCTACCTGCT CGATCTGCCC
GCCCGGGGCG GCGGGATCGC GGCCTACCTG CCCGGGGCGG TCATGGTGCT GCTGGCGGCC
ATGGCGCTGT CGGTGACGCT GACCTCGGCC AAGCTCGGAC GCCGCAAGCG GCAGGTGCGC
GCAGGCTACC GCCGGTCGCC CTTCGGCTGG TTCATCCGGT TCCTGACCGG CAACCCGATC
ATGCCCCTGG TGGCGATCGG CGTCGTGGGC TTCGTGGTCG CCACGACCTT CGCGCTCTTC
CAGGAAAACA ACCGCGGTGT GGAGTTCTTC GTCGCCTCCG AGCCCGAGCA GGCCATCGTC
TACGTGCGCG CCCGCGGCAA CCATTCGCTG ATGGAAAAGG ACGCGCTGCT GCGCCAGGCC
GAAGAGATCG CGCGCAATAC CGGCGGGATC GAGTCGGTCT TCGCCTTTGC CGGCGAGGGC
GGGCTGAACC AGAATACCGG CGGCGCCTCG GCCCCGCTCG ACACCGTGGG CACGATCCAG
CTGGAGCTCG TGCCGTGGGA GGACCGGCAG GGCGGTGACC TGGCCCAGGG CCACGCCATC
CTCGACCGGC TGGAAGCCGA GCTGCGCACC ATCCCCGGCG TGCAGACCGA GATCCTGGAG
ATGAACCAGG GCCCCGCGGG CGCCAAGCCC GTGCATTTGC GCCTGACGGG GGATGATTTC
AGCCAGCTGG CGCAGGCCGC CCAGATCGTC CGCGACCGGT TCGAGACGAC CGAGGGGCTG
CGCGACATCG AAGACACCCG CCCCCTGCCC GGCATCGACT GGCAGATCGA CGTGGATGTG
GCCGCCGCCG GACGCTACGG CGCCGATGTG GCCACCGTGG GCGCCATGGT GCAACTGGTG
ACCCGCGGCA TCCTGCTCGA CACCATGCGC GTGGACAGCT CCGACGAGGA GATCGAGATC
CGCGTCCGCC TGCCCGAGGG GGACCGGGTG CTCTCCACGC TCGATTCGCT GCGGGTCCGC
ACCGCCCAGG GGCTCGTGCC CCTGTCGAAC TTCATCACCC GCCAGCCGGT GCCGAAACTT
GGCCAGATCG ACCGGGTCGA CGGCACGCGC TATTACGACG TGAAGGCCGG GGTCCGGGAC
GGTCTGACCA ACGCCGATGG CAGCGTCATC AACCCCGCCG AACGCATCGC GCAGCTCACC
ACATGGCTGG AGACCGAGGC CGACCTGCCC TCGGGCGTCA CCTGGGAATG GACAGGCGAG
CAGGAGGACG AGGCCGAGAG CCAGGCCTTC CTCAGCCAGG CCTTCATCGG CGCGCTGGCG
CTGATGTTCA TCATCCTGCT GGCGCAGTTC AACAGCTTCT ACAACGCCAC GCTGGTGCTG
CTGGCGGTGG TTCTGTCCAC GACCGGGGTG CTGATCGGGA TGATGGTCAT GCAACAACCC
TTCTCGGTCA TCATGACCGG CACGGGCATC GTGGCGCTCG CGGGCATCGT GGTGAACAAC
AACATCGTGC TGATCGACAC CTACCAGGAA TACTCGAAAT ACATGCCCCG GCTGGAGGCG
ATCGCCCGCA CCGCGCAGGT CCGTATCCGG CCCGTGCTGC TGACCACGAT CACCACCATG
GCCGGGCTGA CACCGATGAT GTTCGGGCTC AGCCTCGATT TCTTCGGCGG CGGCTACACC
ATCGACAGCC CCACCGCCCT GTGGTGGAAA CAGCTTGCCA CGGCGGTGGT GTTCGGTCTG
GGCGTGGCCA CGGTGCTGAC CCTGATCTTC ACGCCCTCGA TGCTGGCGCT CCGGGTCTGG
CTCGGGGTCG GAGCCTATTC CTCGGTCCGC CAGTTGCGGG CGCTGTCGCT GGGCAAATCC
AGCCGCGCGG CCCGCGACCT CGCGCTCAAG CGCGCCGCGC GCAAGCTGAG TGCGCCGGAA
TTGATCTGGA TCGAGGACGA CAAGCCCGCC GAGAGCGACG ACAAGAAACC GACCGAAGGC
GACATGCCCC CCCTGCGCGC CGCGGAATAG
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| Protein sequence | MTGLVDWAAS RARMVIAFVM LSLLAGTFAY ISLPKEGEPD IEIPALFVSV PFPGISAEDS
EKLVIQVMET ELSDLDGLDR MTSTAADNYA GVVLEFEFGW DKTKIIADVR DRMNTAEAKF
PSGYEKYSIN EINFSQFPII VVNLSGSLPE RTLLRVAKDL QDTLEGLEPV LEAGLAGHRE
EMLEVVIDPL RLESYNVTAG ELLSVVQNNN QLIAAGEVET DQGAFAVKIP SAFDEQTDVL
NLPVKVNGDR VVTLGDLADI RLTFEDRTGT ARYNGDDTVA LQVVKRKGFN LIDTATLVRE
TVADAQASWP PELRDAVEIN ISMDQSRIVA SMVRQLEGSV LTAIALVMIV VLAALGTRSA
LLVGFAIPTS FLLCFALLAV MDITVSNIVM FGLILAVGML VDGAIVVVEY ADRRISEGSG
PMAAYTEAAK RMFWPIVSST ATTLCAFLPM LFWPGVAGQF MGMLPVTLIF VLTASLVVAL
IYLPVVGGVA GRLSRVLERL AAGLMPLPWV SRVGLTVLSG VAMYTAVLQL LNPSYLLDLP
ARGGGIAAYL PGAVMVLLAA MALSVTLTSA KLGRRKRQVR AGYRRSPFGW FIRFLTGNPI
MPLVAIGVVG FVVATTFALF QENNRGVEFF VASEPEQAIV YVRARGNHSL MEKDALLRQA
EEIARNTGGI ESVFAFAGEG GLNQNTGGAS APLDTVGTIQ LELVPWEDRQ GGDLAQGHAI
LDRLEAELRT IPGVQTEILE MNQGPAGAKP VHLRLTGDDF SQLAQAAQIV RDRFETTEGL
RDIEDTRPLP GIDWQIDVDV AAAGRYGADV ATVGAMVQLV TRGILLDTMR VDSSDEEIEI
RVRLPEGDRV LSTLDSLRVR TAQGLVPLSN FITRQPVPKL GQIDRVDGTR YYDVKAGVRD
GLTNADGSVI NPAERIAQLT TWLETEADLP SGVTWEWTGE QEDEAESQAF LSQAFIGALA
LMFIILLAQF NSFYNATLVL LAVVLSTTGV LIGMMVMQQP FSVIMTGTGI VALAGIVVNN
NIVLIDTYQE YSKYMPRLEA IARTAQVRIR PVLLTTITTM AGLTPMMFGL SLDFFGGGYT
IDSPTALWWK QLATAVVFGL GVATVLTLIF TPSMLALRVW LGVGAYSSVR QLRALSLGKS
SRAARDLALK RAARKLSAPE LIWIEDDKPA ESDDKKPTEG DMPPLRAAE
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