Gene Dshi_1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1061 
Symbol 
ID5711029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1095405 
End bp1096250 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content67% 
IMG OID641266972 
Producthypothetical protein 
Protein accessionYP_001532404 
Protein GI159043610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.820088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCTG CGAAACTTCC GGTCTCTCTC TTCTGGTACC AGGACGAGAT CCCCGCCCCG 
GTGCAGGGGT GCCTCGACAG CTGGTGCGGG GACGCGCGGC TGGAGACACG GGTCTATTCG
GCCCGCGATG CGGAGCGGTT CTTCGAGGCA CGGGGCATGG GGCGGGAGTT GGCGGCGTTT
CGCCGGTGCG GCCCTTATGC GATGGCCTCG GATTTCTTCC GATTGCATGT GCTGCTGGAG
CGCGGCGGGC TTTACGTGGA TGCCAACTGG GCGCAGAAAC AGGCGTTTGC GCCGGTGCTG
GCGGGATGGA TGTCGGGGGG GTATCACGGC CTGATCGCGG AAATCACCGA TTTCTATCGC
GATCAGCCCG ATCCGCTGGC GCGGTTTCTC ATTGCCCGGG GGGGCGAGAT GCTGCTGAAC
GGGATCGTGT TCGTGCATCG GCCCGGGGAT CCCTTCCTGG CGCTGAGTGC CGAGGTCTGC
CGCCGCAACA TCGAGGCGGG TGCCTGCGAG CAGATCGCCT TCGCGGCAGG CAGCGGGGTG
ATGGCGGCGC TGCTCTTGCT GCGGGAGTTC GAGACCCGCG CGGCCTATGT CGAGACATTG
GAGCAGATGG CCACGCGGTC CTTCGTCGGG CATGACATCG GCCCGAGCAT CGCATCGGTG
ATCGCGGCCA CCGAGGGGGC GGACCATGAC GCCCTGCGGC GCCATTTCGC GGGTTTCCGG
ACGGTCCCCG GCCCCAGCCT GCAGGCCTAC CTGTCCCGAG ACGGGCTGGG CCAGCGCCAC
AAGGACCACT GGACGCTGCA CAAGGGCAGT CTCTACAAGC CCGCGGACGG AAACGCGGCG
CCCTGA
 
Protein sequence
MDAAKLPVSL FWYQDEIPAP VQGCLDSWCG DARLETRVYS ARDAERFFEA RGMGRELAAF 
RRCGPYAMAS DFFRLHVLLE RGGLYVDANW AQKQAFAPVL AGWMSGGYHG LIAEITDFYR
DQPDPLARFL IARGGEMLLN GIVFVHRPGD PFLALSAEVC RRNIEAGACE QIAFAAGSGV
MAALLLLREF ETRAAYVETL EQMATRSFVG HDIGPSIASV IAATEGADHD ALRRHFAGFR
TVPGPSLQAY LSRDGLGQRH KDHWTLHKGS LYKPADGNAA P