| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1054 |
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| Symbol | |
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| ID | 5711022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1087709 |
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| End bp | 1088599 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641266965 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001532397 |
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| Protein GI | 159043603 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG ACTACGCCAA TCCCTGGGCC TACCGGCTGA AATGGGCCTA CATGCTCCTG
CTGGTCACGA CGCTGATGAG CCCGGTGCTC TACGTGATGT ATATCTCGTT CAACGCCAAC
GGTTTCGGCG CGCGGGCCTA CGATTTCACG TGGGAATGGT ACCGGCTGGT CTTTTCGGAC
GAGTTGCTTC TGAACGCCCT GCGCTGGACC TTCTCGCTGG CCATCGTGGT CACACTCATC
ACCGTGCCCT TCGCGGTGCT GGCGGCGAAA TACTACAAGA CCGCGCAGAA CAAGCTGCCG
GTGGTGTTCC TGCTGCTGGC ACCGCTCTTC GTGCCGCCGG ACATCCTCGG CTCGGCCCTG
CTGGTCTATT TCAAGTCCCT GAACTCCAGC TTCATCTGGC TCGGGGACCA GCTGGGCACC
ACGGCCTTCG ACGGTTGGTT CCGGCTGAGC TTCTTCACCG CGACCGTGGG GCTGATCATC
TACACCATTC CTTACGCCTT CATCGTGGTG CTGATCACCA TGGGCCGCTA CCGCACCGAG
CAGACCGAGG CCGCCCGCGC CTGCGGGGCG GACGGCTGGC GCGCCTTCTG GGATATCGAG
TTTCCCCAGA TCCGCGCGGG CGTGTTCAGC GCATGCTCGT TCTGCATCAT CCTGTGCTTC
AACGAATACA CCCGCACGAG CCTGCTGAAG GGCGGGTTCG ACACCTTCAC CACGGTGCTG
ATCTCACAGA TGCTCAACAC CGGCATGTCG CCGCAAAGCT ACGCGATGTC GTCGATGGTG
GCGTTCACCG CCATCGCGAT CATCGGCAGC ATCATTATTT TCACCCTGAT CCGCTCCGAG
AGCCTGACCC GCACCGCGCG GGCCAAGGCC GAGCCGATCA TGTCGTCCTG A
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| Protein sequence | MTDDYANPWA YRLKWAYMLL LVTTLMSPVL YVMYISFNAN GFGARAYDFT WEWYRLVFSD
ELLLNALRWT FSLAIVVTLI TVPFAVLAAK YYKTAQNKLP VVFLLLAPLF VPPDILGSAL
LVYFKSLNSS FIWLGDQLGT TAFDGWFRLS FFTATVGLII YTIPYAFIVV LITMGRYRTE
QTEAARACGA DGWRAFWDIE FPQIRAGVFS ACSFCIILCF NEYTRTSLLK GGFDTFTTVL
ISQMLNTGMS PQSYAMSSMV AFTAIAIIGS IIIFTLIRSE SLTRTARAKA EPIMSS
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