| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1046 |
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| Symbol | |
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| ID | 5711014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1079893 |
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| End bp | 1081023 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641266957 |
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| Product | amidase |
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| Protein accession | YP_001532389 |
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| Protein GI | 159043595 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00289131 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACG CGGCGCGGCT GCGGGCGCTG GACGACCGCT TCGCCTTTCT CGAAGACCCC
TCGACCCAGG TGATACCGGG GTCGGGCACG GGGCCTCTGG CCGGGCTCCG CATCGGGGTC
AAATCCAACA TCGCCGTGGC CGGGCAGGCC TGGACCGCCG GGATCGCCGG GCGCGGCGAG
GTGCTGGCCG AGGCCGATGC CGAGGTCATC GCGCGTCTGC GCGCCGCCGG GGCCGACCTG
CTGCCGGGGC TGACCATGGA CGAGGCCGCC CTGGGGGCGG CGACCGAGAC GAGCGGCCTG
CGCGCAACGC AAAACCCCTT TGCCCCGGGC CACAGCGTCG GTGGCAGCTC CGGCGGCGCG
GCGGCGGCGG TGGCCTGCGG CGCGGTGCCC GTGGCGCTGG GCAGCGACAC GCTGGGCTCC
GTGCGGATCC CGGCGGCCTA TTGTGGCGTG CTGGGCTTCA AGCCGGGGGC AGGGGTGCTG
CCGCTGGGCG GGGTGGTCCC GCTGGACCCC GCGCTCGACA CGCTGGGCCT TTTGGCGCGG
CGGGTGGCGG ATCTGCGCGC GGTCTACGCG GTGCTGGCGC CGGAGGCCGT GGCCGAAACG
GCGCAGGTGG TGCAGCTTGC CCCGCAAGCG GACGTGGCCT GCGCGCCCGA GGTGCAGACG
GCCCTGGCGC GCGCGGCGCG GCTGCTCGAC GCCAGCGGTC CCGACCGGCT GGAGGGGTGG
GAGGCGGAGG CGCTGCGCAT GGCGGCCTTC ACGCGGGTCT GCGCCGCGGC GGCCACGACC
CTCGCCGATC AGCCGATTGC CAGCGTCGCG GTGCGCAGCG CCATGGCCTA CGGCGCGCGG
CTCACCCCCG ACGGGCTGGC CCGGGCCGAG GCGCTCTGCG ACCGGGTCGC CGCGGCCCTG
CGCGCGCGGC TCCCCCCTGG CACCGTGGCG CTGACCCCGA CCACGCCGAC CCCGGCCTTT
GCCCGGGGCA CCCCGCCGCC CGCCGATCAG GCCAGCTTCA CGGTGCTTGC CAATCTCGCC
GGTCTGCCCG CGATCTCGGT GCCGATGGGG CCTGCGTCGG TGCAGCTCAT GGCCGGGCCG
GGGCAGGAGG GCACGCTTCT CGCCCTCGCC GACCGGCTGA GCGCGGCCTA G
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| Protein sequence | MTDAARLRAL DDRFAFLEDP STQVIPGSGT GPLAGLRIGV KSNIAVAGQA WTAGIAGRGE
VLAEADAEVI ARLRAAGADL LPGLTMDEAA LGAATETSGL RATQNPFAPG HSVGGSSGGA
AAAVACGAVP VALGSDTLGS VRIPAAYCGV LGFKPGAGVL PLGGVVPLDP ALDTLGLLAR
RVADLRAVYA VLAPEAVAET AQVVQLAPQA DVACAPEVQT ALARAARLLD ASGPDRLEGW
EAEALRMAAF TRVCAAAATT LADQPIASVA VRSAMAYGAR LTPDGLARAE ALCDRVAAAL
RARLPPGTVA LTPTTPTPAF ARGTPPPADQ ASFTVLANLA GLPAISVPMG PASVQLMAGP
GQEGTLLALA DRLSAA
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