| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1000 |
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| Symbol | fadD4 |
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| ID | 5710516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1032645 |
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| End bp | 1034366 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266911 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001532343 |
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| Protein GI | 159043549 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00216584 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGATC CAACGCGGCC CTGGATGGCC TTCTATGGCC CGGACGTCCG GCCCGATATA
GACACGCCCG CCTATCGCAC CCTGGGTGAC ATGATCGGGG CGGTGGCCGC GACCTATGGC
ACCGCGCCGG CCTTCACCAC TTGCCTGCCC AACGGGATGA ACGGCACCCT GAGCTTTGCC
CAGGTGGACG AGATGTCGGA TGCTTTCGCG GTGTACCTGC GCGAGGTCGC GGGCCTGAAC
CCCGGCGACC GGGTGGCGTT GCAGATGCCC AACTGCCTGA GCTTTCCCGT CGCGGCCTTC
GGGGTGTTCA AGGCGGGCTG CGTGCTGGTC AATGTCAACC CGCTCTATAC CGCCGAGGAG
ATGGGCAAGC AGTTCCTCGA TGCCGAACCC CATGCGCTGG TCATCGTGGA CATGTTCGCC
GACAAGATCC CCGAGGCGAC GCGCGGCCAC CCGATCCCGA ACATCGTGGT CACACGGATC
GCGGAATTTC TGCCCGCCCT GCCCCGGGGC ATCGTCGGGC TGGTCCAGAA ATACTGGGAC
CGCTCGGTCG CGGAGATCGA GGTGCCCCAT ATCCGGCTGC CCGACGCGCT GGAGGCTGGG
CGCCGTCACC AGGCGGACGA GCGGATCGAG GTGGAGGGCT ATCACCAGGC CGTCGCCCCG
GACGATGTCG CGGTTCTGCA GTATACGGGC GGGACCACGG GCGTGGCCAA GGGCGCGATG
CTGACCCATG CCAACCTGAT CGTGAACATG GAACAGACCA TGGAGCTGAT CGAGGGGCTG
GAGCGGGGCC GCGAGGTCGT TCTGACGGCG CTGCCGCTTT ATCATATCTT CGCGTTTTCC
CTCAACATGC TGGGGTTCTA CTGGATGGGG GCGCGCAATA TCCTGATCCC GTCGCCACGG
CCGCTGGCGA ACCTCAAGCG CGCCTTCGAG AACTACAGGA TCACCTGGAT GAGCGGGGTG
AATACGTTGT TCAACGGGCT GACCAACGAG ATCTGGTTCA CCGACACCCC GCCGAGGCAC
CTGAAATTCG CGGCCGCGGG CGGCATGGCG CTGCAATCCT CGGTCGCGGA GCGCTGGCGC
GAGATCACCG GGACGGATGT GCTGCAGGGT TACGGGTTGA CCGAAACCTC GCCGATCCTG
AGCCTGGAGC CTTTGGGCAA GACCCGGAGC GGATCCATCG GCATTCCCCT GCCCGCGACC
CGGCTGGCAT GTCTGGATGA CGACGGCAAG CAGGTCGCCA TCGGCGATCG CGGGGAGATC
GCGGCCAAGG GGCCGCAGGT GATGAAGGGC TACTGGAACA AGCCCGAGGA GACCGCAAAT
GTCCTGCAGA ACGGCTGGTT CCTCACGGGC GATATCGGGG TGATGGATGC GGATGGCTAT
TTCCACATCG TCGATCGCAA GAAGGACATG GTCGTGGTCT CGGGCTTCAA CGTCTATCCC
AACGAGGTGG AGGATTGCCT TGCCTCCCAT CCCGGCATCA TCGAGGCGGC GGTGATCGGG
GTGCCGGACG GGGCCACTGG CGAAGCGGTC AAGGCGTTCG TGGTCAAGGG TGATAGCGGG
CTGAGCGAGG CGGATATCCG CGCCCATTGC AAGGAGCACC TGACAGCCTA CAAGGTGCCG
AAACGGGTCG AATTCCGCGA CGAGCTGCCG AAGTCCAACG TGGGCAAGAT CCTGCGAAAG
GATCTGCGCG CCGAGGAACT TGCCCGCACG GGAGGGGCCT GA
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| Protein sequence | MEDPTRPWMA FYGPDVRPDI DTPAYRTLGD MIGAVAATYG TAPAFTTCLP NGMNGTLSFA
QVDEMSDAFA VYLREVAGLN PGDRVALQMP NCLSFPVAAF GVFKAGCVLV NVNPLYTAEE
MGKQFLDAEP HALVIVDMFA DKIPEATRGH PIPNIVVTRI AEFLPALPRG IVGLVQKYWD
RSVAEIEVPH IRLPDALEAG RRHQADERIE VEGYHQAVAP DDVAVLQYTG GTTGVAKGAM
LTHANLIVNM EQTMELIEGL ERGREVVLTA LPLYHIFAFS LNMLGFYWMG ARNILIPSPR
PLANLKRAFE NYRITWMSGV NTLFNGLTNE IWFTDTPPRH LKFAAAGGMA LQSSVAERWR
EITGTDVLQG YGLTETSPIL SLEPLGKTRS GSIGIPLPAT RLACLDDDGK QVAIGDRGEI
AAKGPQVMKG YWNKPEETAN VLQNGWFLTG DIGVMDADGY FHIVDRKKDM VVVSGFNVYP
NEVEDCLASH PGIIEAAVIG VPDGATGEAV KAFVVKGDSG LSEADIRAHC KEHLTAYKVP
KRVEFRDELP KSNVGKILRK DLRAEELART GGA
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