| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0973 |
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| Symbol | |
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| ID | 5710486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 994296 |
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| End bp | 995162 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641266881 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001532316 |
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| Protein GI | 159043522 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.193338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCA AACATTCCCG ATCAGCGGCG CGCCTGATGA TGGCTCCGGC GGTCATCCTG
CTCCTCGGCT GGATGCTTGT CCCCCTGACA ATGACCCTGC TGTTCTCGTT CAAGCAGTAT
CTGCCCCTGC GGGGTGGCGA CCTGGGTTGG GTGGGATTTG ACAACTACAT TCGTTTCGTT
TCTTCGAGTG CCTTCTGGCC CTCGGTTACA GCCACCTTGA TCATCGTCGG TGGCGTGCTG
GCGATCACGA TTACCCTGGG CGTCTTGCTC GCGATCCTTC TCAACCAGCC GATGTGGGGT
CAGGGCGTTG TCCGGATCCT GGTGATCGCG CCCTTCTTCG TGATGCCCAC CGTATCCGCA
CTGGTCTGGA AGAACATGTT CATGGATCCG ACCAACGGGC TGTTGGCGCA TCTGTGGCGC
TTCTTCGGGG CCGAGCCGGT TTCGTGGCTG TCGGAGGCCT CGATGACCTC GATCATCATG
ATCGTGTCCT GGCAATGGCT GCCCTTCGCG ACGCTCATCC TGCTGACGGC GATCCAGTCG
CTCGACAGCG AGCAGCTGGA AGCCGCCGAG ATGGACGGGG CCCCGCCGGT GAAACGCTTC
GCCTTCATCA CCCTGCCCCA CCTGAGCCGC GCCATCACCA TCGTGCTGCT CATCCAGACG
ATCTTTCTGC TGGCGATCTT CGCCGAGATC TTCGTGACCA CGGGCGGCGC CTTCGGCACA
CGGACGCTCA CTTACCTGAT CTTCCAACGC GTGCTCGAAA GCCAGAATGT CGGCCTCGGC
TCTGCCGGAG GGGTGTACGC AATCATTCTC GCCAATATCG TTGCCATCTT CCTGATGCGC
ATCGTCGGCA AGAACCTGGA CGCGTGA
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| Protein sequence | MATKHSRSAA RLMMAPAVIL LLGWMLVPLT MTLLFSFKQY LPLRGGDLGW VGFDNYIRFV
SSSAFWPSVT ATLIIVGGVL AITITLGVLL AILLNQPMWG QGVVRILVIA PFFVMPTVSA
LVWKNMFMDP TNGLLAHLWR FFGAEPVSWL SEASMTSIIM IVSWQWLPFA TLILLTAIQS
LDSEQLEAAE MDGAPPVKRF AFITLPHLSR AITIVLLIQT IFLLAIFAEI FVTTGGAFGT
RTLTYLIFQR VLESQNVGLG SAGGVYAIIL ANIVAIFLMR IVGKNLDA
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