| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0969 |
|---|
| Symbol | mtlK |
|---|
| ID | 5710482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 990448 |
|---|
| End bp | 991947 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641266877 |
|---|
| Product | mannitol dehydrogenase domain protein |
|---|
| Protein accession | YP_001532312 |
|---|
| Protein GI | 159043518 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.124507 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAGC TGATCTCCCT CTCGAACGCG ACCCTGGGGC AACTGGCCAT CGAACGCCCC
CGATACGACC GGAGCCGTCT GACGCCCGGG ATCGTGCATA TCGGCGTCGG CAATTTCCAC
CGGGCCCACC AGGCCTGGTA CCTGCATCGC CTGATGCAGG CGGGCCAAGC GCTCGACTGG
GCGATCATCG GCGCAGGGGT GCGCCCCTAT GACGCGGCCA TGCGCGACAA GCTCCTGGCG
CAGGATTGCC TGACCACCCT GATCGAACTT GCCCCCGACA ACGTCTCGGC CGAGGTGGTC
GGCTCGATGA TCGACTACCT GCCCATCGTG GACGGCAACG GCCCGCTCAT CGCCCAGATG
GCGGACCCGG CGATCCGGAT CGTCGCCATG ACCGTCACCG AGAGCGGCTA TTACATCGAC
CCGGTAACCA AGGGGTTCGA TGCCTCGCAC CCGGATCTCG TCCATGATGC GGCGCAGCCG
GACCGGCCGC GCACAGCCTT CGGCGCCATC GTCGCTGCCC TCCGGGCGCG ACGGGCCGCG
GGCCACGGTC CCTTCACCTG CCTGAGCTGC GACAACCTGC AGGGCAATGG CGATATCCTG
CGCCAGACCG TGGTCTCTCT TGCGCGCCTG ACCGATCCGG CACTGGCCGA CTGGATCGAC
ACCCATGCCA GTTTCCCCAA TTCCATGGTC GATTGCATCG CGCCGGCCAC CGGCCCCAAG
GAGCTGGCCC TTGCTGCTCA GTTCGGCATC CGGGACGTGG CTGTCGTCAC CCACGAAGCC
TTCCGCCAAT GGGTGATCGA GGATGAGTTC TGCGCGGGCC GCCCCAACTG GGACGCGGTC
GGGGCGACCT TCTCCGACGA TGTGCATGCC TACGAGACAA TGAAGATCCG CATTCTGAAC
GCGGGCCACC AGGTGTTGGC GAATGCGGGC GAGAATCTCG GGATCGAGAC GATTTCCGGC
TGCATGGCCC ATCCCGGCAT CGCAGCCTTC TTCGGCAAGG TGCAGCGGGA AGAGATCGCG
CCGACGGTCG CCCCGGTCCC CGGCAAGACG CCTGCTTCCT ATGTCAACCT GATCGAAACC
CGCTTTGCCA ACCCGCGGAT CGTCGACACG ACCCGGCGCG TGGCCTTCGA TGGCTCAGCC
CGGCATCCCG GCTTTGTCCT GCCGATCGTA CGGGACCAGC TTGCGGCCGG ACGCTCTGTC
GAGGGTCTGG CGCTGGTCGA GGCGCTCTGG GCGCGGATGT GCGCCGGGGT GCGCGAGGAC
GGGACCGAGA TCGCGCCGAA CGACCCGCTC TGGGACAGGC TTGCCCCCGT GGCTCGCGCG
GCGCGGACCG ATCCGGCGCT CTGGCTCGGG CAAACCGGGC TCTACGGTGA TCTCAAGCAA
TCGGAACCCT TCGCGGACGC GTTCTGCGCC TGGCTCGTGC TGATCTGGGA CAAAGGCTGC
GAGGCGGCCC TGCGCCGCTA TATCACCGGC ACGGAGCGGC ACACGGCCAC GGCGTCCTGA
|
|---|
| Protein sequence | MDQLISLSNA TLGQLAIERP RYDRSRLTPG IVHIGVGNFH RAHQAWYLHR LMQAGQALDW
AIIGAGVRPY DAAMRDKLLA QDCLTTLIEL APDNVSAEVV GSMIDYLPIV DGNGPLIAQM
ADPAIRIVAM TVTESGYYID PVTKGFDASH PDLVHDAAQP DRPRTAFGAI VAALRARRAA
GHGPFTCLSC DNLQGNGDIL RQTVVSLARL TDPALADWID THASFPNSMV DCIAPATGPK
ELALAAQFGI RDVAVVTHEA FRQWVIEDEF CAGRPNWDAV GATFSDDVHA YETMKIRILN
AGHQVLANAG ENLGIETISG CMAHPGIAAF FGKVQREEIA PTVAPVPGKT PASYVNLIET
RFANPRIVDT TRRVAFDGSA RHPGFVLPIV RDQLAAGRSV EGLALVEALW ARMCAGVRED
GTEIAPNDPL WDRLAPVARA ARTDPALWLG QTGLYGDLKQ SEPFADAFCA WLVLIWDKGC
EAALRRYITG TERHTATAS
|
|---|
| |