| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0950 |
|---|
| Symbol | rplY |
|---|
| ID | 5710641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 974567 |
|---|
| End bp | 975202 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641266861 |
|---|
| Product | 50S ribosomal protein L25/general stress protein Ctc |
|---|
| Protein accession | YP_001532296 |
|---|
| Protein GI | 159043502 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
|---|
| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGAG AGATTCCGGA TCTTGTAGCG GAACCGCGCG CGGGGACAGG CAAGGGGGCC
GCCCGTCAAG CGCGTCGTGA TGGATATGTG CCCGGTGTGG TCTATGGGGG CGGGGCCGAT
CCGCAGCCCA TTCAGATCAA GTTCAACGAG CTGCTGCGGC GGCTCAAGGC GGGCCGGTTC
ATGGCAACCC TGTTCAACCT CAAGGTCGAG GGACAGGAAG ACGTGCGCGT GATCTGCCGC
AACGTGCAGC GGGACGTGGT CAAGGACCTG CCCACGCATC TGGACCTGAT GCGTCTGCGT
CGGACGTCGA AGGTGAACCT TTTCATTCCG GTGGAGTTCA TCAACGAGGG TGCCGCCCCC
GGCATCAAGA AGGGTGGCGT GCTGACCGCC GTGCGTCCCG AGGTGGAGCT GCGCGTGACC
GCGGGCGACA TTCCCGAGAG CATCACGGTC GACCTGACCG GGCTGGACAT CGGCGACACG
GTGACGATCA GTTCCGTCAC CCTGCCCGAA GGGGCAACGC CGACCATCGA CCGGGACTTC
GTGATCGCCA ACATCCAGGC GCCGTCGGGC CTGCGCTCGG CCGATAACGA GGCCGATGAG
GAAGAGACCG AAGAGGCGAC CGCCGAAGAG GTGTGA
|
|---|
| Protein sequence | MAGEIPDLVA EPRAGTGKGA ARQARRDGYV PGVVYGGGAD PQPIQIKFNE LLRRLKAGRF
MATLFNLKVE GQEDVRVICR NVQRDVVKDL PTHLDLMRLR RTSKVNLFIP VEFINEGAAP
GIKKGGVLTA VRPEVELRVT AGDIPESITV DLTGLDIGDT VTISSVTLPE GATPTIDRDF
VIANIQAPSG LRSADNEADE EETEEATAEE V
|
|---|
| |