Gene Dshi_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0946 
Symbol 
ID5710637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp971323 
End bp971721 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content62% 
IMG OID641266857 
Producthypothetical protein 
Protein accessionYP_001532292 
Protein GI159043498 
COG category[S] Function unknown 
COG ID[COG3651] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.541769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATATG AACGCGCTGA ATCGGTAAAT GTGTTGGGCG GCGTGCTGCA GCCCTGCTCC 
CAAGACCCGC TGACCGGGTT CTTTCGCAAC GGATGCTGCG ACACCTCGGC CATGGACCAG
GGCAACCACA CGGTCTGTGC GATCATGACC GCCGAATTCC TCGCCTATTC CAAATACGTT
GGAAACGACT TGTCTACGCC GCGACCGGAA TTCATGTTCC CCGGCCTGAA GCCCGGGGAT
CAATGGTGCC TGTGCGCAGG TCGGTTCCAG CAGGCCCACG AAGAGGGCTG TGCGCCGAAA
GTCCGGCTGG AGGCGACCCA TCTGCGCGCG CTGGACGCGG TGTCGCTCGA AACCCTGGCA
CAACACGCAG TCGAGCCCCG CGAAACCCCG GATCGTTAA
 
Protein sequence
MAYERAESVN VLGGVLQPCS QDPLTGFFRN GCCDTSAMDQ GNHTVCAIMT AEFLAYSKYV 
GNDLSTPRPE FMFPGLKPGD QWCLCAGRFQ QAHEEGCAPK VRLEATHLRA LDAVSLETLA
QHAVEPRETP DR