| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0938 |
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| Symbol | |
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| ID | 5710629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 964490 |
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| End bp | 965500 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641266849 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001532284 |
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| Protein GI | 159043490 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.762549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAT CCCGGTCCAT TCCCCTCATT CGCGCGGCCG CCATCGCGCC GATGCGCCGC
TGGCTGGCCG AGCAGGCCCA GGATGCAGGA CCGCTGCTGG CGCGTGCCGG GCTCGACTGG
GTGCCCGAGG ACAATCCGCT TGTGCCGATC CCCCTGCGGG CCGGCATCCG GTTTCTCGTC
GAGATCGCGC GCGTGGCCGG GCCCGACGCG CCCATGCGCA TCGCGCGCGA ACGGGGCGTC
TTCGAAATCG GTCCAATCGG CAGCCTCGCC CTGGCCGCGC CGACCGTGCG CGCGGCGCTG
CACACCATTG CCCGAAACAT GCCGCGCCAT TGCACTCACG AGTTCTTCAC GGTGGAGGAT
TGTCCCCAGG GCGTGCGTAT CGGCGATGGC TGGGCCATCA ATATCGGCGA TGCCGAGGCG
CGCCACCACG TTCAGCAATA CGTGGCGGCC CTGGTGGAGG GGATCTGCCA TGTCTCCGGG
GCATCCGGTG ATAGCCTCGC GCGCGTCATC ATGATCCCGC ACCCGACATT TGCACTCGGC
CATCTCCGGC CATGGCTCGG CGATCGGGTG ATACCGGGCG CAGCCCGACC GCTGATGGTC
GAGATCCCGG ACGCGGTTGC GGATCGCCCC ATGCCGGCCG GGGAGGGCCG GGACCCCGGG
CAAGACTGGC TGCCCATCCG CGCCGGCGCG ACGCTGTCCG ACAGCATCGG AACGCTGGTG
GAAAGCATGC TGGCCCAGAC GCCACCGTCC ATCGAGCGGG TCGCGAGCGC CGCAAGCCTG
AGCCCCCGCA CCTTGCGACG CCGCCTTGCC GACGAGGGGA CCACCCTGTC CGAGATCGTC
GACCGAACGC GCGCCAGACT GGCCATCGCC CGGCTTGCCA GTGACCGCCC GCCTCTGCTG
GGCGCACTTG CGCAAGAGCT GGGATATGCC CACCAGTCCG CCCTGACGCG CGCCGCCAAG
CGCTGGGGCG TTCAGATCGC TTCCTCAAAG CACAACATGG AGGGAGGATA G
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| Protein sequence | MTASRSIPLI RAAAIAPMRR WLAEQAQDAG PLLARAGLDW VPEDNPLVPI PLRAGIRFLV
EIARVAGPDA PMRIARERGV FEIGPIGSLA LAAPTVRAAL HTIARNMPRH CTHEFFTVED
CPQGVRIGDG WAINIGDAEA RHHVQQYVAA LVEGICHVSG ASGDSLARVI MIPHPTFALG
HLRPWLGDRV IPGAARPLMV EIPDAVADRP MPAGEGRDPG QDWLPIRAGA TLSDSIGTLV
ESMLAQTPPS IERVASAASL SPRTLRRRLA DEGTTLSEIV DRTRARLAIA RLASDRPPLL
GALAQELGYA HQSALTRAAK RWGVQIASSK HNMEGG
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