| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0917 |
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| Symbol | |
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| ID | 5710607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 939057 |
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| End bp | 942221 |
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| Gene Length | 3165 bp |
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| Protein Length | 1054 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266827 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001532263 |
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| Protein GI | 159043469 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGA TCCGTTTTTC CATCGAACGC CCCATCGCGG TGATTGCGGC CGTGATCATG
GCGATCCTCT TCGGGATCAT CGCCCTGTCG CGCATCCCGA TCCAGCTCGC GCCCGATGTG
CGCAAACCCG TCGTGGTGAT CGAGACCAAC TGGCCCGGTG CAGCCCCCGC CGAAGTCGAA
CGCGAGATCA TCAACCCGCA GGAGGAAGCC CTGCGCGGGC TCGACGGGCT GGACATCATG
ACCTCGCGAT CCCAGTCGGG ATCTGGCGAG ATCACCCTGG AATTCGCGCC GGGCACGGAC
ATGAGCCAGA CGCTGCTTCT GGTGTCGAAC CGGCTGGACC GGGTGGGGGA TTACCCCGCC
GAGGCGAGCG AGCCGTCGCT GGACACCTCG GGCGACGATG ACAGCCCGAT CGCCTGGGTC
ATCGTCACCG ATGCCGGCAC GGCCCAGCGG CCCCTGCCGA CCTATGGCGA TTTCATGGAG
GACGTGGTCA AGGACCGCAT CGAGCGGATC GAGGGTGTCT CGGCGGTCAA TGTGTTCGGC
GGGGTCAGCC GCGAATTGCA GATCGTGGTG GACCCGCGGC GGCTGGCGCT GTTCGGGCTG
ACCGTGCCGG AGGTGGTAGC GCGGCTGCGG TCGGAGAACA TCTCGCTCTC GGCCGGGGAC
GTGGAGGAAG GCAAGCGGCG CTATATCGTG CGGGCCGAGG GCGCGCTCGA CACCGTGGAG
GCGGTGGGCG GCGTGGTGCT GCGCTCCGAG GCGTCCTCGG GCACGCTCGG CCGGGTTCTG
GTGCGCGATG TCGCCGAGGT CCAGTTCGAC TATGGCGAGC CCACGGCGCG GTTGCGATTC
AAGGGGGAAT CCGGTCTGGC CTTCAATATC GTGCGGGATC GCGGGGCCAA TGTGATCGAG
ACGATGGAAG AGGTGCGCCG GGTCCTGGGC GAGTTGCAGG AGGGGCCGGT TGCCGCCCAG
GGCCTTTCCC TGGAGCAGGT CTATGACGAG ACGATCTATA TCGAGGGCGC GATCGCGCTG
GTGACCCAGA ACATCTGGAT CGGGGGGGCG CTGGCGGCGC TGGTGCTGCT GATCTTTTTG
CGCAGTCCGC GGGCGACCCT GGTGGTCAGC CTCGCGATCC CGGTTTCGAT CGTGGCGACC
TTCGTGGCCA TGGCGGCCAC GGGGCGGACG CTGAACGTGG TCAGCCTCGC GGGCATCGCC
TTCGCGGTGG GGATGATCGT GGATGCGGCC ATCGTGGTGC TGGAGAACAT CTACAGGCTG
CGCGAACAGG GCAAATCCCG CTCCGAGGCG GCCTATCTGG GCGCGCGCCA GGTCTGGGGC
GCGATCCTGG TCTCGGCGCT GACCACTGTG CTGGTCTTCG TGCCGATCCT CATCATGGAA
TTGGAGGCGG GGCAGCTTTT CCGCGACATC GCGGTGGCGA TCTCGGTCTC GGTCCTGTTG
TCGCTCGTGG TGGCGGTGAC GGTGATCCCG GCGCTCGCCA AGCGGTTGTT GAAGGATGGC
CAGCAGACGA CGCTGCCGCT CTGGGGGATC GATCATTTCG CCCGCGGCTT CAAGGCGGCG
GTGATGTGGT ACGTGCGTAT GACCGTGCGG TTCCGGGCGC TGGGCATCCT GATGGTCGGG
CTGATCGGCG GGACGGCGGC GGTGGCGACG GTGGTGTTCC TGCCCCGGCT GGAATACCTG
CCGGAGGGCA ACCGCAACCT GGTCTTCGGG CTGATCATTC CACCGCCGGG CTACAACCTG
GACACGACCG AGACCATCGC CGAACGGATC GAGCGGGCGG CGCGCCCGAT GTGGGAGGCC
GCACCGGCGC TGGAGACGCC GGAGGGCACG CCCACGGTGG AGAACTTCTT CTTCGTGGCG
ACGCCGGGGA ACTCTTTCGT CGGCGCCACG GCGCTGGACG GGCCGCGGGT GGCGGAGTTG
ATCCCGCTCT TGTCCGGGCC GATCTTTGCC GAGCCGGGGA CCTTCGGGTT CATGACCCAG
CCGTCGCTCT TCGGGCGTGG CGTGGGCGGC GGGCGGACGA TCGAGCTCAA TGTCTCGGGC
CAGGACCTGG AGCAGATCCT CGGGGTGGCG GGGCGGGCCG CGGGGCTGGT GGCGGGGCTG
CTGCCGCGCT CGGAGGGGCA CCAGTTCCGG CCCATTCCGG GGCTGGAGCT GGGCGCGCCG
GAGGTACGGC TGGTGCCGGA TCGGCTGGCC CTGGCGGATG CGGGTCTGGA TGCAGGCGCC
TTGGCCGCGA CGGTGGATGC CTATAATGAC GGGTTGCGCG TGGCCGAGAT CACCGAGGGT
GCGGACCGTC TGGACCTGGT TTTGAAGGGC GACACAAGCC TGTCGGCGGG ATTCCGGACG
CAGGATGTGG GCTCCTACCC GGTGGTGACG CCCTCGGGGG ATATCGTGCC GGTCTCGGCG
CTTGCAGATG TGATCGTGAC CGCGGGCCCG ACGGAGATCC GGCACCGCGA CCGGCTGCGG
ACAGTGACCC TGGAGGTGCG CCCGTCCGAC GCGCTGCCGC TGGAGGCGGC GGTGGAGCTG
TTGCAGACCG AGGTGGTCGC GGTGCTGGAG GGCCAGGGCG TGCCGCCGGG CATTCGGCTC
ACCGTGTCGG GGACCGCCGA CCAGTTGAGC CAGACCTGGG AGGCGATCCA GATCAACCTC
GTGGTGGCGC TGGTCATCGT GTTCCTGGTG ATGGCGATCC TGTTCGAGAG TTTCGTGCTG
CCGCTGGTGA TCCTGATCTC GGTGCCCGTG GCGGCCGCGG GCGGGGTCGG GGGGCTTGCG
CTGCTCAATA CGTTCCAGAC GCAGCCGCTG GATATGCTGA CGCTGCTCGG GTTCATCATC
CTGGTGGGTA TCGTGGTGAA TAATGCGATC CTGATCGTGC ATCAGTCGCT TTATCACTTG
CGTGAGGAGG GTATGTCGCC GGTCGATGCG ATCGAGGAGG CGACGCGGAA CCGGATCCGG
CCGATCTTCA TGTCGACGCT GACGAGCATC ATGGGGATGC TGCCGCTGGT GGTGTTCCCG
GGCGAGGGGT CCGAGCTCTA TCGCGGCCTG GGCGCGGTGG TGGTCGGAGG GTTGTCCATG
TCGGCCTTCC TGACGCTGCT GACGGTGCCG CCCTTGTTGC GGCTCTGCCT TAAGGCGCCG
TCCCCCGAGG AGGTGCCGGT GCTTCAGGCC CAGCCCGCGG AATAG
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| Protein sequence | MNPIRFSIER PIAVIAAVIM AILFGIIALS RIPIQLAPDV RKPVVVIETN WPGAAPAEVE
REIINPQEEA LRGLDGLDIM TSRSQSGSGE ITLEFAPGTD MSQTLLLVSN RLDRVGDYPA
EASEPSLDTS GDDDSPIAWV IVTDAGTAQR PLPTYGDFME DVVKDRIERI EGVSAVNVFG
GVSRELQIVV DPRRLALFGL TVPEVVARLR SENISLSAGD VEEGKRRYIV RAEGALDTVE
AVGGVVLRSE ASSGTLGRVL VRDVAEVQFD YGEPTARLRF KGESGLAFNI VRDRGANVIE
TMEEVRRVLG ELQEGPVAAQ GLSLEQVYDE TIYIEGAIAL VTQNIWIGGA LAALVLLIFL
RSPRATLVVS LAIPVSIVAT FVAMAATGRT LNVVSLAGIA FAVGMIVDAA IVVLENIYRL
REQGKSRSEA AYLGARQVWG AILVSALTTV LVFVPILIME LEAGQLFRDI AVAISVSVLL
SLVVAVTVIP ALAKRLLKDG QQTTLPLWGI DHFARGFKAA VMWYVRMTVR FRALGILMVG
LIGGTAAVAT VVFLPRLEYL PEGNRNLVFG LIIPPPGYNL DTTETIAERI ERAARPMWEA
APALETPEGT PTVENFFFVA TPGNSFVGAT ALDGPRVAEL IPLLSGPIFA EPGTFGFMTQ
PSLFGRGVGG GRTIELNVSG QDLEQILGVA GRAAGLVAGL LPRSEGHQFR PIPGLELGAP
EVRLVPDRLA LADAGLDAGA LAATVDAYND GLRVAEITEG ADRLDLVLKG DTSLSAGFRT
QDVGSYPVVT PSGDIVPVSA LADVIVTAGP TEIRHRDRLR TVTLEVRPSD ALPLEAAVEL
LQTEVVAVLE GQGVPPGIRL TVSGTADQLS QTWEAIQINL VVALVIVFLV MAILFESFVL
PLVILISVPV AAAGGVGGLA LLNTFQTQPL DMLTLLGFII LVGIVVNNAI LIVHQSLYHL
REEGMSPVDA IEEATRNRIR PIFMSTLTSI MGMLPLVVFP GEGSELYRGL GAVVVGGLSM
SAFLTLLTVP PLLRLCLKAP SPEEVPVLQA QPAE
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